Pairwise Alignments

Query, 607 a.a., ribosome-dependent GTPase TypA from Serratia liquefaciens MT49

Subject, 599 a.a., GTP-binding elongation factor family protein TypA/BipA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  589 bits (1519), Expect = e-172
 Identities = 295/601 (49%), Positives = 417/601 (69%), Gaps = 3/601 (0%)

Query: 2   IENLRNIAIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNT 61
           ++N+RNIAIIAHVDHGKTTLVDK+L     F     + E ++D+NDLE+ERGITIL+KN 
Sbjct: 1   MQNIRNIAIIAHVDHGKTTLVDKMLLAGNLFRSNQNSGELILDNNDLERERGITILSKNV 60

Query: 62  AINWKDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGL 121
           +IN+   +INI+DTPGH+DFGGEVERV++M D  +L+VDA +GPMPQTRFV +KA   GL
Sbjct: 61  SINYNGTKINIIDTPGHSDFGGEVERVLNMADGCILLVDAFEGPMPQTRFVLQKALEIGL 120

Query: 122 KPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGTDHNEMAE 181
           KPIVV+NKVD+P  RP+ V + VFDL  +L+AT++QLDFP+IY SA      TD  +  +
Sbjct: 121 KPIVVVNKVDKPNCRPEEVYEMVFDLMFSLNATEDQLDFPVIYGSAKNNWMSTDWQKPTD 180

Query: 182 DMTPLYQAIVDHVSAPQVELEAPFQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTIID 241
            +TPL   I++++ AP+ +LE   QM I+ LDY++Y G I +GR+ RG +K    +T++ 
Sbjct: 181 TITPLLDCIIENIPAPE-QLEGTPQMLITSLDYSSYTGRIAVGRVHRGTLKEGMNITLVK 239

Query: 242 SEGKTRNGKVGKVLGHMGLERIESTLAEAGDIIAITGLGELNISDTICDTSAVEALPALS 301
             G     K+ ++    GL R+++    +GDI A+ G+    I DT+CD    EALP ++
Sbjct: 240 RNGDMFKSKIKELHVFEGLGRVKTNEVSSGDICALVGIEGFEIGDTVCDFENPEALPPIA 299

Query: 302 VDEPTVTMFFNVNTSPFCGKEGKFVTSRQILERLNKELVHNVALRVEETEDADAFRVSGR 361
           +DEPT++M F +N SPF GK+GKFVTSR I +RL KEL  N+ALRV ++E+   + VSGR
Sbjct: 300 IDEPTMSMLFAINDSPFFGKDGKFVTSRHIHDRLMKELDKNLALRVRKSEEDGKWIVSGR 359

Query: 362 GELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPFENVTLDIEEQHQGSVMQAMGE 421
           G LHLSVLIE MRREG+EL V +P+VIF+EIDG K EP E +T+++ E++   ++  +  
Sbjct: 360 GVLHLSVLIETMRREGYELQVGQPQVIFKEIDGVKCEPIEELTINVPEEYSSKIIDMVTR 419

Query: 422 RKADLKNMDPDGKGRVRLDYVIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYDDVRPGEVG 481
           RK ++  M+  G+ R+ L++ +PSRG+IG R   +T ++G  ++   F  Y     GE+ 
Sbjct: 420 RKGEMVKMENTGE-RINLEFDMPSRGIIGLRTNVLTASAGEAIMAHRFKEYQP-HKGEIE 477

Query: 482 QRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGK 541
            R NG +I+   G A A+A+  LQDRGK F+    EVY GQ++G HS  NDL +N    K
Sbjct: 478 HRTNGSMIAMESGTAFAYAIDKLQDRGKFFIFPQDEVYAGQVVGEHSHDNDLVINVTKSK 537

Query: 542 KLTNMRASGTDEATTLVPAIKMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRKRAS 601
           KLTNMRASG+D+   L+P ++ +LE+ALE+I +DE VEVTP ++R+RK  L E +RKRA+
Sbjct: 538 KLTNMRASGSDDKVRLIPPVQFSLEEALEYIKEDEYVEVTPKAMRMRKVILDEIERKRAN 597

Query: 602 R 602
           +
Sbjct: 598 K 598