Pairwise Alignments

Query, 269 a.a., bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase from Serratia liquefaciens MT49

Subject, 282 a.a., DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase from Synechococcus elongatus PCC 7942

 Score =  176 bits (445), Expect = 6e-49
 Identities = 114/279 (40%), Positives = 141/279 (50%), Gaps = 11/279 (3%)

Query: 1   MPELPEVETSRRGIEPYLVGHSIQYAVVRNAR-LRWPVSEQIL-ALSDQPVRSVQRRAKY 58
           +PELPEVET RRG+    +        V  +R +  P  E  L AL    ++  +RR KY
Sbjct: 1   LPELPEVETVRRGLTQQTLQRVCTGGEVLLSRTIATPTPELFLVALQQTQIQEWRRRGKY 60

Query: 59  LLIELDH-----GWIIVHLGMSGSLRMLAEETEAGKHDHVDLVISNGMTLRYTDPRRFGA 113
           LL +L       G   VHL M+G        T   KH  V L       LR+ D R FG 
Sbjct: 61  LLADLSREGEPAGTWGVHLRMTGQFFWTEPATPLTKHTRVRLRFEGDRELRFIDIRSFGQ 120

Query: 114 WLWCE-DLAASNV---LAHLGPEPLSEAFNGAYLYEKSRSKRTLIKPWLMDNKLVVGVGN 169
             W   D    +V   L+ LGPEP +  F   YL ++ R  +  IK  L+D  LV G+GN
Sbjct: 121 MWWVPPDRPVESVITGLSKLGPEPFAPEFTARYLRDRLRRSQRPIKTALLDQSLVAGIGN 180

Query: 170 IYASESLFTAGILPDRPAGSLSKAEAELLAETIKAVLLRSIEQGGTTLRDFLQSDGKPGY 229
           IYA ESLF  GI P  P+  L+K +AE L E I  VL  SI  GGTT  DF    G  G 
Sbjct: 181 IYADESLFRTGIHPTTPSDRLTKIQAEKLREAIVEVLTASIGAGGTTFSDFRDLTGVNGN 240

Query: 230 FAQELQVYGRAGEPCRACGTPIESAKHGQRSTFFCRRCQ 268
           +  +  VYGR  +PCR CGTPI+  K   RS+ FC RCQ
Sbjct: 241 YGGQAWVYGRKDQPCRTCGTPIQKLKLAGRSSHFCPRCQ 279