Pairwise Alignments

Query, 269 a.a., bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase from Serratia liquefaciens MT49

Subject, 271 a.a., DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) from Sphingomonas koreensis DSMZ 15582

 Score =  202 bits (513), Expect = 8e-57
 Identities = 116/273 (42%), Positives = 163/273 (59%), Gaps = 7/273 (2%)

Query: 1   MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQI-LALSDQPVRSVQRRAKYL 59
           MPELPEVET+ RG+ P L G  I+  ++R   LR P+ + +   L+   V ++ RRAKY 
Sbjct: 1   MPELPEVETTVRGLAPALEGRRIRRVLMRRPDLRRPMPQDLGQRLTGASVTALGRRAKYG 60

Query: 60  LIELDHG-WIIVHLGMSGSLRMLAEETEAGKHDHVDLVISNGMTLRYTDPRRFGA--WLW 116
           LI+ D G  +I HLGMSG  R+   ET    HDH+ L    G +L   DPRRFG+   + 
Sbjct: 61  LIDTDRGDTMIFHLGMSGRWRVDPSETLT--HDHLILETDEGRSLALNDPRRFGSIDLVP 118

Query: 117 CEDLAASNVLAHLGPEPLSEAFNGAYLYEKSRSKRTLIKPWLMDNKLVVGVGNIYASESL 176
            + L A    A +GPEPL   F  A+L      +   +K  L+D ++V G+GNIY  E+L
Sbjct: 119 TDALDAWPAFAAMGPEPLGPDFTAAHLAAAFDGRAAPVKALLLDQRIVAGLGNIYVCEAL 178

Query: 177 FTAGILPDRPAGSLSKAEAELLAETIKAVLLRSIEQGGTTLRDFLQSDGKPGYFAQELQV 236
             +GI P R AG ++      L + I+AVL  +IE GG++LRD+ + DG+ GYF+++ +V
Sbjct: 179 HMSGIAPTRAAGRIATPRLAQLVDAIRAVLASAIEAGGSSLRDYARPDGELGYFSKQWRV 238

Query: 237 YGRAGEPCRACGTPIESAKHGQRSTFFCRRCQR 269
           YGR GEPC  CG P++      RSTFFC +CQ+
Sbjct: 239 YGREGEPC-LCGAPVQRRVDSGRSTFFCAKCQK 270