Pairwise Alignments

Query, 299 a.a., HTH-type transcriptional activator IlvY from Serratia liquefaciens MT49

Subject, 290 a.a., transcriptional regulator ilvY (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  320 bits (819), Expect = 3e-92
 Identities = 159/289 (55%), Positives = 209/289 (72%), Gaps = 3/289 (1%)

Query: 1   MDLRDLKLFLHLAESHHFGRTAKAMHVSPSTLSRQIQRLEEILGQPLFLRDNRTVQLTDA 60
           MD+R LKL+LHL +S HF +TA+ MHVSPSTLSR +QRLEE +   LF RDNR+V LT A
Sbjct: 1   MDIRSLKLYLHLCDSLHFAKTAEQMHVSPSTLSRALQRLEEEVNAKLFERDNRSVTLTHA 60

Query: 61  GEQLKDFAQQTLLQYQQLKHSLGQHGPSLSGELRLFCSVTAAYSHLPPILDRFRAQHPLV 120
           G + K FA+QTL  ++ L+HS+      L G L L+CSVTAAYSHLP +L+RFR +HP V
Sbjct: 61  GREFKLFAEQTLHHWRNLRHSIDLKQDVLRGTLNLYCSVTAAYSHLPQLLERFRQEHPFV 120

Query: 121 EIKLTTGDAADAVDKVQSNEADLGIAGRPETLPTSVAFTKIGEIPLVLIAPALPCAVRSQ 180
           EI LTTGDAA+A+ ++Q N AD+ IA  P+  P ++ F KI ++PL LIAP + CAV+ Q
Sbjct: 121 EIALTTGDAANALAEIQQNRADIAIAALPDPFPATLHFAKIDDVPLSLIAPTMRCAVQQQ 180

Query: 181 AFAEQPDWANIPFILPEHGPSRKRIELWFRRQRIANPLIYATVGGHEAIVSMVALGCGIA 240
               Q DWA +PFI+P+HGP R+R + WF++  I +P IYA V G EAI SMVALGCG++
Sbjct: 181 ISQTQIDWARVPFIIPDHGPGRRRADNWFKQMGI-SPNIYAQVSGQEAIASMVALGCGVS 239

Query: 241 LIPGVVVDNSPEPVRNRISQLENISMVEPFELGVCVQKKRLSDPLIDAF 289
           + P VV++NS  PVR+RI  L +   + PFELG C + KRL DP+++AF
Sbjct: 240 ISPEVVINNS--PVRDRIQLLPSPVSIAPFELGCCCKVKRLGDPIVNAF 286