Pairwise Alignments

Query, 328 a.a., autoinducer 2 ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 335 a.a., sugar ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  111 bits (278), Expect = 2e-29
 Identities = 89/315 (28%), Positives = 146/315 (46%), Gaps = 18/315 (5%)

Query: 6   ALLNACVVSACMLSTTPAFAAEKYEIAVVAKVTGIPWFNRMEVGVNDAAKKLDVNAYQTG 65
           AL  A +  +C  S     +  K  IA V K    P+    + G   A K+        G
Sbjct: 12  ALCVALLAISCAASAADLKSGLK--IAFVPKQINNPYEVIADDGGMTAIKEFKGVGKAVG 69

Query: 66  PSTPDPAAQVKVIEDLIAKNVNAIIVVPNDAKVLEPVLKKAREKGIVVLTHESPDQQIG- 124
           PS    ++QV+ I  LI +  +AI++  NDA  + P LKKA  +GI V+T +S     G 
Sbjct: 70  PSDAGASSQVQYINTLITQRQDAIVIAANDANAVVPYLKKAMSQGIKVVTFDSDTAPEGR 129

Query: 125 QWDIETIDSEKYAQANVDELAKDMGGKGGYAIYVGSLTVPLHNAWADSAIKY--QKAKYP 182
           Q  +   ++E   +  V  ++K MGG+G +A+   +      N W    IK+  ++ K P
Sbjct: 130 QLFVNQANAEGIGRGQVQLVSKLMGGEGEFAVLSATPNATNQNTW----IKWMQEELKKP 185

Query: 183 DMFEVTSRLPVAESID---KSYATTLDLMKTYPQMKGIIGFGSLGPIGAGQAVAKKRAKD 239
           +  ++   + +A   D   KS+  T  L++ YP +K I+   ++G   A + ++   +K 
Sbjct: 186 EYSKI-KLVKIAYGNDDDQKSFTETQGLLQAYPNLKAIVAPTTVGIAAAARYISTSSSKG 244

Query: 240 KIAVVGIAMPAQAAPYLARGDIKKALLWDPKDAG----YALVTVADQLLQGKEVTKDLSI 295
           K+AV G+  P Q   ++  G +K   LWDP   G    YA   +A   + GKE  +    
Sbjct: 245 KVAVTGLGTPNQMRAFVKNGTVKAFQLWDPGQLGYLAAYAAAALASGTISGKE-GESFDA 303

Query: 296 EGLGKADVDMDKKVI 310
             LGK  +    ++I
Sbjct: 304 GKLGKRTIGPQGEII 318