Pairwise Alignments

Query, 328 a.a., autoinducer 2 ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 334 a.a., LacI family transcription regulator from Burkholderia phytofirmans PsJN

 Score =  207 bits (526), Expect = 4e-58
 Identities = 129/312 (41%), Positives = 165/312 (52%), Gaps = 6/312 (1%)

Query: 23  AFAAEKYEIAVVAKVTGIPWFNRMEVGVNDAAK-KLDVNAYQTGPSTPDPAAQVKVIEDL 81
           A AA    I  V KVTGI WFNRM+ GV   AK   ++NAYQTGP   D A Q+K+IEDL
Sbjct: 23  AQAATNETIVTVVKVTGINWFNRMDDGVKQFAKDNPNINAYQTGPGRADAAQQLKIIEDL 82

Query: 82  IAKNVNAIIVVPNDAKVLEPVLKKAREKGIVVLTHESPDQQIGQWDIETIDSEKYAQANV 141
           IAK V AI VVP D   LEP LKKA ++GI V+THE+ + +    DIE  D+  Y     
Sbjct: 83  IAKKVTAIAVVPYDPPTLEPALKKAMDRGIKVVTHEADNAKNTMVDIEAFDNTAYGAGLN 142

Query: 142 DELAKDMGGKGGYAIYVGSLTVPLHNAWADSAIKYQKAKYPDMFEVTSRLPVAESIDKSY 201
           + LA  M   G +A+ VGSL       WAD  I   KAKYP M  V  +L      +++Y
Sbjct: 143 ERLASCMHDDGKWAVLVGSLGSRSQVQWADGGIGNAKAKYPKMNLVEPKLETNNDGERAY 202

Query: 202 ATTLDLMKTYPQMKGIIGFGSLGPIGAGQAVAKKRAKDKIAVVGIAMPAQAAPYLARGDI 261
               ++++ +P +KG  G  SL  IG G+AV +   + KI V G  +P +A  +L  G I
Sbjct: 203 EVAKEVLRKHPDLKGFQGSSSLDVIGIGRAVEEAGMQGKICVYGTGLPTEAGKFLESGAI 262

Query: 262 KKALLWDPKDAGYALVTVADQLLQGKEVTK--DLSIEGLGKADVDMDKK---VIRFNKIL 316
                WDPK AG A+  VA  L+ GK V    DL I G  K  V        ++R    +
Sbjct: 263 NGIAFWDPKLAGIAMNKVAQMLVDGKTVENGADLGIPGYTKVTVAKGPGKGIIVRGQGWV 322

Query: 317 EVTKDNAKSLGF 328
            V K N K   F
Sbjct: 323 NVDKSNYKQYPF 334