Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Serratia liquefaciens MT49

Subject, 356 a.a., protease DegS (RefSeq) from Shewanella amazonensis SB2B

 Score =  304 bits (778), Expect = 3e-87
 Identities = 169/352 (48%), Positives = 236/352 (67%), Gaps = 11/352 (3%)

Query: 7   RSVVIGLIVAGLLLVALPVLRSSNA-LFAEKHDSTLDETPVSYNKAVRRAAPAVVNIYNR 65
           ++V+ GL++A + L+A   L + +  LF ++ +   +   +S+ KAVRRAAPAV NIYN 
Sbjct: 10  KAVLFGLVMAAVFLLAQNYLGNDHGNLFRDRGNGGSE---LSFAKAVRRAAPAVANIYNI 66

Query: 66  NMN-----GTANVLLLGSGVIMNERGYILTNRHVIKDAQQITVVVQDGRRYEALLVGSDS 120
           +++      +  +  LGSGVI+++ GYILTN HVIK A +I + +QDGRR+ A +VGSD 
Sbjct: 67  SIDQRQPLNSGALQGLGSGVIISKEGYILTNYHVIKKADEIVIALQDGRRFSAEVVGSDP 126

Query: 121 LTDLAVLKIDQGNLPVIPINTARTAHVGDVVLAIGNPYNLGQTVTQGILSATGRISMSTT 180
            TDL+VLKI+   LPV+P+N      VGDVVLAIGNPYNLGQT+TQGI+SATGR  +S +
Sbjct: 127 ETDLSVLKIEGDKLPVVPLNLTTPPQVGDVVLAIGNPYNLGQTITQGIISATGRNGLS-S 185

Query: 181 GRQTFLQTDASINRGNSGGALVNSLGELIGINTLTYDKITDGETPEGLGFAIPIELATKI 240
           G Q FLQTDA+IN GNSGGAL+++ G++IGINT  Y +I D     G+ FAIPI LA  I
Sbjct: 186 GYQDFLQTDAAINAGNSGGALIDTNGDVIGINTAAY-QIGDEGGGHGISFAIPIRLAYSI 244

Query: 241 MDKLIRDGRVIRGYFGIQGKEIIPLRSSNSGIDRLQGIIVTEITQGGPAGNAGFHINDVI 300
           M KLI  GRVIRG  GI G+ + P  +    +  ++G++VT + + GPA +A     DVI
Sbjct: 245 MGKLIEHGRVIRGALGISGEALTPFMAQVLKMQEVRGVLVTGVDRNGPAADAQMQPRDVI 304

Query: 301 INVDNKPAVSVLETMDQVAEIRPGTEIPVVVLREGKRITLKMTVGEFPEDNN 352
           I    +  VS    MD++AE +PGTE+ + ++R+GK  TL + +GE   + N
Sbjct: 305 IEYGGESVVSAEMLMDRIAETKPGTEVQMTIIRQGKAYTLPVIIGEKATEYN 356