Pairwise Alignments

Query, 327 a.a., substrate-binding domain-containing protein from Serratia liquefaciens MT49

Subject, 317 a.a., Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 63.2 bits (152), Expect = 8e-15
 Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 11/223 (4%)

Query: 62  IEIIETNAQGDVSKESSFIDTMIARDVNAIVLSAVSVNGSVRAIKRANEASIPVICYNTC 121
           +E++  +AQ   +K+SS ++  + + V+A+V++   V     A+       +P++  +  
Sbjct: 60  VELLVQDAQSSSTKQSSDVENALTQGVDAMVVAPNDVTALAPALNEVLSEKVPLVTVDRR 119

Query: 122 INEKGVDKYVYAYLVGDPYEFGKKLGNTAADYFIEKKITEPAIAVIN-CEAFEVCVQRRK 180
           +  +G D  V  Y+  D    G+ +    A+           +A I         + R K
Sbjct: 120 V--EGTDTPV-PYVTADSVAGGRLM----AELVTSNMKNGARVAFIGGTPGSSTAIDRAK 172

Query: 181 GFEEALKAKVPGMKIVANQEGT-VLDKAISVGEKLL--ISSGKVDAIFGESGGATLGAVK 237
           G  E LKA     ++VA Q G     KA+SV E +L  +S+   DAI   SG   LGA +
Sbjct: 173 GVHEGLKAGGGKFQLVAEQSGEWERAKAMSVAENILTSLSANPPDAIICASGDMALGAAE 232

Query: 238 AVRNQNKVGQTVVFGSDMTTEIAQELVNRQVLQAVVDISGKKM 280
           AVR     G+  V G D   E+ + + +  +   V     K++
Sbjct: 233 AVRATGLKGKVKVIGFDAYPEVLRAIRDGDIAGIVEQSPSKQI 275