Pairwise Alignments

Query, 709 a.a., TonB-dependent siderophore receptor from Serratia liquefaciens MT49

Subject, 653 a.a., TonB-dependent receptor C-terminal domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 89.0 bits (219), Expect = 7e-22
 Identities = 82/289 (28%), Positives = 127/289 (43%), Gaps = 23/289 (7%)

Query: 13  SVAMALPVLAADNKSQNDAPADTITVVGNWLDNPDTSSVLLNHPGARSIVTEQQMHEQGD 72
           S ++  PV+AAD+ S      + + V+G     P      LN     +++    +   G 
Sbjct: 17  SFSIIAPVMAADDTSTAKVD-EHLVVIGRSDKTP------LNIAANVNVIDAAAIEMSGA 69

Query: 73  QTIADTLRGVPGVQVRDSNGTGGSDISLNVGVRGLTSRLSPRST-ILMDGVPLAVAPYGQ 131
             + D LRG  G+Q+ D+N      I  +  +RG ++  +  +T IL+DG  L       
Sbjct: 70  TNLTDVLRGQSGIQISDNN------IGTSFAMRGFSASTAVNNTLILLDGRRLNNIDIAA 123

Query: 132 PQLSMAPLSIGSLQSVDVVRGGGAVRYGPQNVGGVINFVTKDIPKTFGGAASVQTQGASH 191
           P L+  PL++  ++ V+++ G   V YG Q VGGVIN VTK  P+  GG  SVQ  G S 
Sbjct: 124 PSLNAIPLNL--VERVEILSGSAGVLYGDQAVGGVINIVTKS-PENTGG--SVQLSGGSF 178

Query: 192 GGLKTLTSTSLGGTADNGFGAELLYSGLHGQGYRDNNDNTDIDDFMLKTRYAFTDRDELL 251
              +     S  G  +  +   L  S   G  YR +N N +    + + +Y  T  D   
Sbjct: 179 NTYEGRGDVS--GAINKDWRYFLSGSYNQGDNYRQHNAN-ETGSILGRIQYK-TATDSFF 234

Query: 252 ANFHYYDAKSGMPGGLSSAQYAQNPFQSTRPWDQFEGRRKDMSFKYKHQ 300
               YYD     PG L+  Q+  +P QS+   +            Y+HQ
Sbjct: 235 VETSYYDDDRENPGSLTVDQFKFDPRQSSNKSEYVHEMTTAARSGYQHQ 283