Pairwise Alignments

Query, 550 a.a., multidrug ABC transporter permease/ATP-binding protein from Serratia liquefaciens MT49

Subject, 378 a.a., spermidine/putrescine ABC transporter ATPase subunit (RefSeq) from Shewanella loihica PV-4

 Score = 93.2 bits (230), Expect = 2e-23
 Identities = 70/209 (33%), Positives = 110/209 (52%), Gaps = 14/209 (6%)

Query: 341 AVGPLNLTLRRGELVFLIGGNGSGKSTLAMLLTGLYQPVSGQILLDGIAQNPADMHDYRR 400
           AV  ++L + RGE+  L+GG+GSGKSTL  +L G  +P  G+I LDG  Q+  DM  Y R
Sbjct: 35  AVDDVSLNINRGEIFALLGGSGSGKSTLLRMLAGFEKPTEGRIYLDG--QDITDMPPYER 92

Query: 401 LFSAIFTDFHPFQLLQGPEG--------GQPDAELVESWLHRLNMKNKLEFDGLRVTNPQ 452
             + +F  +  F  +   +           P AE+ +     L + + +E    R  N Q
Sbjct: 93  PINMMFQSYALFPHMTVAQNIAFGLKQDKMPKAEIEQRVKEMLKLVH-MEPYAKRKPN-Q 150

Query: 453 LSQGQRKRLALLLAVAEERDILLLDEWAADQDPQFRRIFYRELLPQLRALGKTVFAISHD 512
           LS GQR+R+AL  ++A+   +LLLDE     D + R     E++  L A+G T   ++HD
Sbjct: 151 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRTQMQLEVVDILEAVGVTCVMVTHD 210

Query: 513 -DHYFEHADRLLQMRDGHLSELTGSDREL 540
            +     A+R+  M DG +++ TGS  ++
Sbjct: 211 QEEAMTMAERIAIMNDGWIAQ-TGSPMDI 238