Pairwise Alignments

Query, 550 a.a., multidrug ABC transporter permease/ATP-binding protein from Serratia liquefaciens MT49

Subject, 574 a.a., lipid A export permease/ATP-binding protein MsbA from Ralstonia sp. UNC404CL21Col

 Score = 98.6 bits (244), Expect = 6e-25
 Identities = 119/529 (22%), Positives = 215/529 (40%), Gaps = 42/529 (7%)

Query: 44  AGDPLAVLPEFLGLLALLMAVTLGSQLALTALGHHFVFRLRGQLVKRIMDTHIERIEQLG 103
           AG    V    +G+  +       S   L+ + +  +  LR ++ +R++       ++  
Sbjct: 50  AGKLWQVPAMLVGIAVVRGIAQFASTYLLSLVSNKVLLNLRMKMFERLLQAPASYYQRNT 109

Query: 104 SAALLASLASDIRNI----TLAFVRLPELVQGVILTLGSAAYLGWLSPQMLAVTAIWVAV 159
           +A+++ ++  ++  +    T  F+ L      V+  L    Y  W   ++  V A+ + +
Sbjct: 110 AASIINAVIFEVNQVLQVLTGVFITLVRDSMTVLALLVFLFYTNW---RLTLVVAVILPI 166

Query: 160 TVFGSGCLVSRVYRHLTNVRESEERLYQH----YQSAIDGRKELALNRDRA-KALYRQAY 214
                G L+SR+ R L ++    + L        + A+ G K + L+   A ++L   A 
Sbjct: 167 I----GLLMSRINRRLRSLNRESQNLTNQAAYVVEEAVGGYKVVKLHGGEAYESLRFNAM 222

Query: 215 QPDAEEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSLGWADTAVAATYSLTLLF 274
                 Y   +  A   +     +   + L  I  +  +              + + +L 
Sbjct: 223 TNRLRGYAMRVAVAGGLNQPVTQFLAALALSVILAIAMLQAQANQTTVGGFTGFVMAMLL 282

Query: 275 LRTPLLQAVGAFPTL----ISAEVAFNKVKSLRLADYQEEFPAGTTKAWQTLELREVMFH 330
           L +PL         L     +AE  F  + +       +E      +A   +    V F 
Sbjct: 283 LISPLKHLTDVNQPLQRGLTAAEFIFGLIDT---PIEPQEGGKKIDRARGDVRFDNVTFR 339

Query: 331 YGATEEKAGFAVGPLNLTLRRGELVFLIGGNGSGKSTLAMLLTGLYQPVSGQILLDGIAQ 390
           YG   E    A+  +NL ++ GE+V L+G +GSGK+TL  LL   + P SG I LDG A 
Sbjct: 340 YG---EDGRAALDNVNLHVKPGEVVALVGPSGSGKTTLVNLLPRFFDPTSGTISLDGDAL 396

Query: 391 NPADMHDYRRLFSAIFTDFHPFQ--LLQGPEGGQPDAELVESWLHRLNMKNKLEFD---- 444
               +HD RR  + +  D   F   +      G  DA  ++    R  ++     D    
Sbjct: 397 ADLALHDLRRQIAFVSQDVVLFNDTIAANVAYGARDASEIDMARVRRALEAAYLTDVVDN 456

Query: 445 -------GLRVTNPQLSQGQRKRLALLLAVAEERDILLLDEWAADQDPQFRRIFYRELLP 497
                   +     +LS GQR+RLA+  A+ ++  IL+LDE  +  D +  R     L  
Sbjct: 457 LPEGIDTNIGDNGSKLSGGQRQRLAIARAIYKDAPILILDEATSALDSESERQVQAALER 516

Query: 498 QLRALGKTVFAISHDDHYFEHADRLLQMRDGHLSELTGSDRELASKDSV 546
            +   G+T   I+H     E+ADR++ +  G ++E  G+ REL  +D +
Sbjct: 517 LME--GRTTLVIAHRLSTIENADRIIVLEHGKIAE-AGTHRELIERDGL 562