Pairwise Alignments

Query, 550 a.a., multidrug ABC transporter permease/ATP-binding protein from Serratia liquefaciens MT49

Subject, 378 a.a., spermidine/putrescine ABC transporter ATPase subunit (RefSeq) from Shewanella sp. ANA-3

 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 14/209 (6%)

Query: 341 AVGPLNLTLRRGELVFLIGGNGSGKSTLAMLLTGLYQPVSGQILLDGIAQNPADMHDYRR 400
           AV  ++LT+ +GE+  L+GG+GSGKSTL  +L G  +P SG+I LDG  ++  D+  Y R
Sbjct: 35  AVDDVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTSGRIFLDG--EDITDLPPYER 92

Query: 401 LFSAIFTDFHPFQLLQGPEG--------GQPDAELVESWLHRLNMKNKLEFDGLRVTNPQ 452
             + +F  +  F  +   +           P AE+ +     L + + +E  G R  + Q
Sbjct: 93  PINMMFQSYALFPHMTVAQNIAFGLKQDKLPKAEIEQRVQEMLKLVH-MEQYGKRKPH-Q 150

Query: 453 LSQGQRKRLALLLAVAEERDILLLDEWAADQDPQFRRIFYRELLPQLRALGKTVFAISHD 512
           LS GQR+R+AL  ++A+   +LLLDE     D + R     E++  L  +G T   ++HD
Sbjct: 151 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRTQMQLEVVEILERVGVTCVMVTHD 210

Query: 513 -DHYFEHADRLLQMRDGHLSELTGSDREL 540
            +     A R+  M DG +++ TGS  ++
Sbjct: 211 QEEAMTMAGRISIMSDGWIAQ-TGSPMDI 238