Pairwise Alignments

Query, 339 a.a., HTH-type transcriptional regulator GalR from Serratia liquefaciens MT49

Subject, 335 a.a., DNA-binding transcriptional regulator GalS from Vibrio cholerae E7946 ATCC 55056

 Score =  371 bits (953), Expect = e-107
 Identities = 195/330 (59%), Positives = 238/330 (72%)

Query: 1   MATIKDVARLAGVSVATVSRVINNSPKASEGSRTAVLAAMEQLQYHPNANARALAQQSTE 60
           MATIKDVAR AGVSVATVSRVIN SPKAS+ S   V +AM +L Y PNA ARAL  QST 
Sbjct: 1   MATIKDVAREAGVSVATVSRVINKSPKASQASIDTVTSAMHKLGYRPNAAARALVNQSTN 60

Query: 61  TLGLIVSDVSDPFFGAMVKAVEQVAYATHNFLLIGNGYHEAEKERQAIEQLVRHRCAALV 120
           T+G++VSDVSDPFFG +VKAV+ VA+     LLIGNGYH AE+ER+A+E L+  RC ALV
Sbjct: 61  TIGVLVSDVSDPFFGTLVKAVDTVAHREGKHLLIGNGYHRAEEERRALELLINSRCDALV 120

Query: 121 VHAKKLTDRELSGWMQQIPGMVLINRTLPGFESRCVALDDRYGAWLATRHLIQQGHQRIA 180
           +H+K L + EL  +  ++  +VLINR +P    RC++LD++ GA+LAT  LI+QGH+ IA
Sbjct: 121 IHSKALPNEELIEYANEVKTLVLINRHIPQLADRCISLDNQKGAYLATDFLIRQGHRNIA 180

Query: 181 IICSTHQISDAADRLQGYLDALQEHGIAVDEKLIAYGEPDEIGGEQAMTELLGRGKNFTA 240
            I S+HQI DA  R+ GY  AL EHGI +    I    PD  GGEQAMT LL +   FTA
Sbjct: 181 CISSSHQIEDADQRIAGYQQALNEHGITLSSSYIEKASPDSEGGEQAMTNLLVKSLPFTA 240

Query: 241 VTCYNDSMAAGALSVLSDNSVDVPGQMSLIGFDDVLISRYLRPRLTTIRYPVVAMATQAA 300
           V  YND+MAAGAL VL +N   VP  +S+IGFDD LISRYLRPRLTT+RYP+  MA +A 
Sbjct: 241 VVAYNDNMAAGALLVLEENGHSVPEHVSVIGFDDALISRYLRPRLTTVRYPIQLMAEKAT 300

Query: 301 ELALALANNQPLPEITNMFSPTLVRRHSVA 330
           +LALALA + P      +FSPT+VRR SVA
Sbjct: 301 QLALALATDAPRENDPMIFSPTIVRRDSVA 330