Pairwise Alignments

Query, 339 a.a., HTH-type transcriptional regulator GalR from Serratia liquefaciens MT49

Subject, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  208 bits (529), Expect = 2e-58
 Identities = 120/333 (36%), Positives = 190/333 (57%), Gaps = 1/333 (0%)

Query: 1   MATIKDVARLAGVSVATVSRVINNSPKASEGSRTAVLAAMEQLQYHPNANARALAQQSTE 60
           MATI DV +LAGVS ATVSRV+N + +    +R AVLAAM+QL Y PN+ A+ALA  +T 
Sbjct: 10  MATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTN 69

Query: 61  TLGLIVSDVSDPFFGAMVKAVEQVAYATHNFLLIGNGYHEAEKERQAIEQLVRHRCAALV 120
           ++GL++      +FG+++   EQ A      LL+ N  +  + E++A+  L   RC A++
Sbjct: 70  SIGLVLPHFESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDAIL 129

Query: 121 VHAKKLTDRELSGWMQQIPG-MVLINRTLPGFESRCVALDDRYGAWLATRHLIQQGHQRI 179
           ++++ L + +L    QQ P  +V++NR L   +     LD    A LA +HL+  GH++I
Sbjct: 130 LYSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSFGLDQTQIAQLAMQHLLNLGHRQI 189

Query: 180 AIICSTHQISDAADRLQGYLDALQEHGIAVDEKLIAYGEPDEIGGEQAMTELLGRGKNFT 239
           A I S         R Q Y  AL E GI +   L+  G+   +GG QAM +LL +G + T
Sbjct: 190 ACITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQGISMT 249

Query: 240 AVTCYNDSMAAGALSVLSDNSVDVPGQMSLIGFDDVLISRYLRPRLTTIRYPVVAMATQA 299
           AV   ND MA GA+  + ++ + VP Q+S+IG D+   + +  P L+++  P+  +  QA
Sbjct: 250 AVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIGELTQQA 309

Query: 300 AELALALANNQPLPEITNMFSPTLVRRHSVASI 332
             LA+ +AN +P      ++  +L+ R S  ++
Sbjct: 310 ISLAVEIANKKPQDAQHRLYQGSLIARESTIAL 342