Pairwise Alignments

Query, 264 a.a., thymidylate synthase from Serratia liquefaciens MT49

Subject, 283 a.a., thymidylate synthase (RefSeq) from Shewanella loihica PV-4

 Score =  140 bits (352), Expect = 4e-38
 Identities = 95/283 (33%), Positives = 137/283 (48%), Gaps = 19/283 (6%)

Query: 1   MKQYLDLMNKVLAEGT-PKADRTGTGTLSIFGHQMRFNLQEG-FPLVTTKKCHLRSIIHE 58
           MKQYL L  +++ EG   + +RTG   L++    + +++    FPL+TT+K   +  I E
Sbjct: 1   MKQYLALCERIINEGVWVENERTGKRCLTVINADLEYDVAANEFPLITTRKSFWKGAIAE 60

Query: 59  LLWFLNGDTNVAYLKENKVSIWDEWADENG------------DLGPVYGKQWRAWGAADG 106
           LL +L G  N A  ++     WD  A+EN             D+G VYG Q RAW   DG
Sbjct: 61  LLGYLRGYDNAADFRKLGAKTWDANANENSAWLNNPHRKGHDDMGRVYGVQGRAWAKPDG 120

Query: 107 RQIDQLTTVLNQLKQDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQR 166
             +DQL  +++ L +  D R  I+S +N GE     L PC     F +    L    +QR
Sbjct: 121 GVVDQLRKIIDNLSKGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180

Query: 167 SCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTQ-LQLTREPR 225
           SCDV LGL FN      L+ ++AQ    + G       + H+Y + +   Q +QL REP 
Sbjct: 181 SCDVPLGLNFNQVQVFALLSIVAQITGHKPGKAYHKIVNAHIYEDQLPLMQEVQLKREPF 240

Query: 226 ALPTLLIKRKPASLFDYR----FEDFEIEGYDPHPPIKAPVAI 264
             P L I     SL D       +DFE+ GY  H  I+ P ++
Sbjct: 241 PSPKLSINPDIKSLEDLETWVTMDDFEVTGYQHHEAIQYPFSV 283