Pairwise Alignments

Query, 451 a.a., sigma E protease regulator RseP from Serratia liquefaciens MT49

Subject, 453 a.a., putative membrane-associated zinc metalloprotease (RefSeq) from Shewanella loihica PV-4

 Score =  466 bits (1200), Expect = e-136
 Identities = 237/449 (52%), Positives = 305/449 (67%), Gaps = 2/449 (0%)

Query: 5   LWNLVAFLIALGVLITVHEFGHFWVARRCGVRVERFSIGFGRALWRRTDRQGTEYVIALI 64
           LWNL +F+IALG+LIT HE+GHFWVARRCGV+VERFSIGFG+A+WR+    GTEYV+A+I
Sbjct: 5   LWNLGSFIIALGILITAHEYGHFWVARRCGVKVERFSIGFGKAIWRKIGADGTEYVVAMI 64

Query: 65  PLGGYVKMLDERVDSVAPEFRHQAFNNKTVWQRAAIVSAGPIANFLFAILAYWLVFIIGV 124
           PLGGYVKMLDERVD+VA E + QAFN K+VWQR AIV AGP+ANF+FAI A +++++IGV
Sbjct: 65  PLGGYVKMLDERVDTVADELKPQAFNRKSVWQRIAIVGAGPMANFVFAIFALYIMYLIGV 124

Query: 125 PSFRPVIGEISPQSIAAHAEISPGMELKSVDGIETPDWESVRLALVAKIGDAETEVGIAP 184
           PS +PVI      S AA  ++   M++ +V      +WE V  ALV  IGD   +V +AP
Sbjct: 125 PSIKPVIESTQSGSPAAVIQVKKPMQVIAVGDRSVRNWEEVTYALVGHIGDDAIDVTLAP 184

Query: 185 FGSSQVVTKT--LDLRQWNFEPDKQDPVVALGIIPRGPQIESVLAEVQSGSAAQKAGLQA 242
                   +T  LD R+W F P+ + P+ +LG+    P I   L  V    AA  AGL+ 
Sbjct: 185 LSGVMGEERTYKLDTRKWKFNPETESPITSLGLNVFRPAITPKLGFVAEDGAAYAAGLRL 244

Query: 243 GDRIVKVDGQLLGRWQTLVKRIHNGPGQPLVLEIERNGAPLSLTLIPDTKPVGKDKSVGF 302
           GD +V VD +  G W   V +I     +P+ + I R+G  L   + P  + +   K  G 
Sbjct: 245 GDTLVAVDNKSYGDWDQFVAKIKASADKPISVTIRRDGEQLKFNVTPKARTIDGGKVEGV 304

Query: 303 AGIIPKVLPLPDEYKTIRQYGPFPALYQAGDKTWQLMSLTVKMLGKLITGDVKLNNLSGP 362
            G+ P   P PDE +   +YG   +L  A DKTWQL+S+++KM+GKL TGDV + NLSGP
Sbjct: 305 IGVAPTQAPWPDEMRLQLEYGVGESLMVAADKTWQLVSVSIKMIGKLFTGDVSVKNLSGP 364

Query: 363 ISIAQGAGASAGVGLVYYLMFLALISVNLGIINLFPLPVLDGGHLLFLAIEKLKGGPVSE 422
           ISIAQGAG SA  GLVY+L FLALISVNLGIINL PLPVLDGGHLL+  IE + G PV E
Sbjct: 365 ISIAQGAGNSANYGLVYFLGFLALISVNLGIINLLPLPVLDGGHLLYYFIEVITGRPVPE 424

Query: 423 RVQDYSYRIGSIVLVLLMGLALFNDFSRL 451
           +VQ+  +R G+ +L++LM +ALFNDFSRL
Sbjct: 425 KVQEIGFRFGAALLLILMSIALFNDFSRL 453