Pairwise Alignments

Query, 373 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Serratia liquefaciens MT49

Subject, 407 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Synechococcus elongatus PCC 7942

 Score =  222 bits (565), Expect = 2e-62
 Identities = 138/383 (36%), Positives = 225/383 (58%), Gaps = 37/383 (9%)

Query: 7   IIRRKSTR-IYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGVDIVRVSVPT 65
           +I R+ TR + VG++ IG   P+ VQSM N  T D++ +V  I+ L  +G +IVRV+VP+
Sbjct: 17  VIHRRPTRSVRVGDIWIGSRHPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPS 76

Query: 66  MDAAEAFKLIKQQV-----NVPLVADIHFD-YRIALQVAEYGVDCLRINPG--------- 110
           +  A+A   IK+++     +VPLVAD+H +  +IAL+VA++ VD +RINPG         
Sbjct: 77  LGHAKAVGDIKKKLQDTYRDVPLVADVHHNGMKIALEVAKH-VDKVRINPGLYVFEKPDP 135

Query: 111 -----------NIGNESR--IRSVVDCARDKNIPIRIGVNGGSLEKDIQEKYGEPTPEAL 157
                       IG + R  +  +V   R+++  +RIGVN GSL + +   YG+ TPE +
Sbjct: 136 NRQGYTPEEFERIGKQIRDTLEPLVTSLREQDKAMRIGVNHGSLAERMLFTYGD-TPEGM 194

Query: 158 LESAMRHVDILDRLNFDQFKVSVKASDVFLAVQSYRLLAARIDQ-----PLHLGITEAGG 212
           +ESA+  + + + ++F    +S+KAS   + + +YRL+A R+D      PLHLG+TEAG 
Sbjct: 195 VESALEFLRLCEEMDFRNLVISMKASRAPVMMAAYRLMAKRMDDLGMDYPLHLGVTEAGD 254

Query: 213 ARSGSVKSAIGLGLLLSEGIGDTLRISLAADPVEEVKVGFDILKSLRIRARGINFIACPT 272
              G +KS +G+G LL+EGIGDT+R+SL   P  E+ V + IL++L +R   + ++ACP+
Sbjct: 255 GDYGRIKSTVGIGTLLAEGIGDTIRVSLTEAPENEIPVCYSILQALGLRKTMVEYVACPS 314

Query: 273 CSRQEFDVIGTVNALEQRLEDIITPMDISIIGCVVNGPGEALVSTLGVTGGHKKSGFYED 332
           C R  F++   ++ +      ++  +DI+++GC+VNGPGE   +  G  G    +     
Sbjct: 315 CGRTLFNLEEVLHKVRAATNHLV-GLDIAVMGCIVNGPGEMADADYGYVGKTPGTIALYR 373

Query: 333 GVRQKDRFDNEQMIDQLEAKIRA 355
           G  +  R   EQ +++L   I+A
Sbjct: 374 GRDEIKRVPEEQGVEELINLIKA 396