Pairwise Alignments

Query, 373 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Serratia liquefaciens MT49

Subject, 374 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.4.3) from Sphingomonas koreensis DSMZ 15582

 Score =  382 bits (981), Expect = e-111
 Identities = 194/359 (54%), Positives = 262/359 (72%), Gaps = 2/359 (0%)

Query: 7   IIRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGVDIVRVSVPTM 66
           I+RR+S +I VGNVP+G  AP+ VQ+MTNT T D +AT++QI+  E  GVDI+RVS P +
Sbjct: 9   IMRRQSRQIMVGNVPVGGDAPVTVQTMTNTPTEDAKATIDQIRRCEDAGVDIIRVSCPDV 68

Query: 67  DAAEAFKLIKQQVNVPLVADIHFDYRIALQVAEYGVDCLRINPGNIGNESRIRSVVDCAR 126
            +  A K I +   VP+VADIHF Y+ AL+ A+ G  CLRINPGNIG+  R+  VV+ A+
Sbjct: 69  ASTAALKQIVRAAKVPIVADIHFHYKRALEAADAGAACLRINPGNIGSADRVNEVVNAAK 128

Query: 127 DKNIPIRIGVNGGSLEKDIQEKYGEPTPEALLESAMRHVDILDRLNFDQFKVSVKASDVF 186
                IRIGVN GSLEKD+ EKYGEP PEAL+ESA+ H+ +L   +F +FKV+VKASDVF
Sbjct: 129 ANGCAIRIGVNAGSLEKDLLEKYGEPCPEALVESALDHIKLLQDRDFHEFKVAVKASDVF 188

Query: 187 LAVQSYRLLAARIDQPLHLGITEAGGARSGSVKSAIGLGLLLSEGIGDTLRISLAADPVE 246
           LA  +Y+ LA  +D PLHLGITEAGG   G+VKSAIG+G LL  GIGDT+R+SL+A+P E
Sbjct: 189 LATAAYQQLAEAVDCPLHLGITEAGGFVGGTVKSAIGIGSLLWFGIGDTIRVSLSAEPEE 248

Query: 247 EVKVGFDILKSLRIRARGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDISIIGCV 306
           EV+VGF+ILK+L IR RG+  ++CP+C+RQ FDVI TV  LE+RL+ I TP+ +S++GCV
Sbjct: 249 EVRVGFEILKALGIRNRGVRVVSCPSCARQGFDVIRTVQTLEERLQHIRTPLSLSVLGCV 308

Query: 307 VNGPGEALVSTLGVT-GGHKKSGFYEDGVRQKDRFDNEQMIDQLEAKIRAKASMMDESN 364
           VNGPGEA  + +G+T GG+ K   Y  G+      ++  M+D +   + AKA+ ++ ++
Sbjct: 309 VNGPGEARETDIGLTGGGNGKHMVYLSGITD-HTVEDADMLDHIVKLVEAKAAEIEAAD 366