Pairwise Alignments

Query, 397 a.a., efflux RND transporter periplasmic adaptor subunit from Serratia liquefaciens MT49

Subject, 417 a.a., hemolysin secretion protein D from Azospirillum brasilense Sp245

 Score =  218 bits (555), Expect = 3e-61
 Identities = 126/354 (35%), Positives = 188/354 (53%), Gaps = 17/354 (4%)

Query: 40  AVAQTRDLEQTVLADGTIEAQKQVSVGAQVSGQIKALYVALGDKVHKGQRVAEIDDLTQQ 99
           AV     +E TV A G I+ +  V VGAQVSGQ+  L+V +G  V +G  +AEID   QQ
Sbjct: 48  AVVGRGTVEDTVTALGKIQPRAYVDVGAQVSGQLTRLHVTVGQMVREGDLLAEIDPALQQ 107

Query: 100 NALRDAEAALKNVQAQRASKMAALHNNQLVYQRQQAIVARGVGVRADLDSAQATLIATRA 159
             +    A    + A  A + A     +    RQ A+   G G     D A+       A
Sbjct: 108 AKVEAGRAERARLTALLAEQRARADFAEAQLARQAALRRSGSGRGEAFDQARMEARIAAA 167

Query: 160 DINALDAQIIQAQIAVNTAQVNLGYTKITSPIDGTIVALPVEEGQTVNAVQSAPTIVKVA 219
            + A  AQI Q    +   +  LGYT+I +P+ GT++A+   +GQT+N+   AP ++++A
Sbjct: 168 QVEATQAQIRQTDSTLQADEAQLGYTRIYAPMSGTLIAVDARQGQTINSAYEAPVLMRIA 227

Query: 220 QLATMTVEAQISEADVVKVKTGMPVYFTILGEPGKRYSTQLRAIEPAPDSINDETTSTST 279
            L+ MTV  Q+SEADV ++  GMP+YFT LG PG+R++ +L+ I PAP           +
Sbjct: 228 DLSAMTVWTQVSEADVTRLTDGMPLYFTTLGHPGRRWTARLQEILPAPPKPPATGNGGGS 287

Query: 280 STSSSTSSSSTAIYYNGLFDVANPDGALRISMTAQVYIVLAKAENAVVIPA--------- 330
           S S    ++++ + Y  LF++AN  G LR  MTAQV+ V A A++AV +P          
Sbjct: 288 SASGGGGAANSVVLYTALFEIANDRGELRPDMTAQVFFVAAAAKDAVTVPVAALTPAAPT 347

Query: 331 --------TALEGDWVQVVDKQGNIARRPVKVGINNNVNAQIISGVLAGEKVIV 376
                   TA E   V ++   G I  R V+VG+ +  NAQI+ G+  GE+++V
Sbjct: 348 SATLPPADTAAERHRVTLISSGGAIETREVRVGVRDRFNAQILEGLAEGERIVV 401