Pairwise Alignments

Query, 397 a.a., efflux RND transporter periplasmic adaptor subunit from Serratia liquefaciens MT49

Subject, 380 a.a., secretion protein HylD from Azospirillum brasilense Sp245

 Score =  123 bits (309), Expect = 8e-33
 Identities = 106/350 (30%), Positives = 161/350 (46%), Gaps = 28/350 (8%)

Query: 34  TPRYITAVAQTRDLEQTVLADGTIEAQKQVSVGAQVSGQIKALYVALGDKVHKGQRVAEI 93
           +P  +T V + RD+  T    G ++A +     A+V G ++ +    G  V K   +  I
Sbjct: 32  SPTVMTEVVRERDVTPTSAFIGRVQAIQDFEARARVEGFVEQVAFQEGQNVTKDTLLYVI 91

Query: 94  DDLTQQNALRDAEAALKNVQAQRASKMAALHNNQLVYQRQQAIVARGVGVRADLDSAQAT 153
           +    Q A+  A+A L   QA        L   Q  +QR Q +  RG   +ADLD AQA 
Sbjct: 92  EQAPYQAAVDSAKADLARAQA-------TLREAQRAFQRAQELRTRGNISQADLDQAQAA 144

Query: 154 LIATRADINALDAQIIQAQIAVNTAQVNLGYTKITSPIDGTIVALPVEEGQTVNAVQSAP 213
                      DA I+Q Q  +  A++NLGYT+I+SPIDG I A  +  G  VN   S+ 
Sbjct: 145 Q-------ETADADIMQTQAKLRQAELNLGYTRISSPIDGRIGATAMTVGDLVN--PSSG 195

Query: 214 TIVKVAQLATMTVEAQISEADVVKVKTGMPVYFTILGEPGKRYSTQLRAIEPAPDSINDE 273
            +  V QL  + V   +S+ D+++V+   P   +   +   R+   LR    A  S  ++
Sbjct: 196 PLATVVQLDPIRVVFSVSDRDILEVQRAAPDLAS--ADAVNRFVPALRL---ADGSEYEQ 250

Query: 274 TTSTSTSTSSSTSSSSTAIYYNGLFDVANPDGALRISMTAQVYIVLAKAENAVVIPATAL 333
               S +++     + T   Y    D ANP G L       V I  A+ E   V+P +A+
Sbjct: 251 KGKVSFASNRIDPQTGTIPVY---ADFANPKGFLLPGQYVTVLIRPAQTERQPVVPVSAI 307

Query: 334 ----EGDWVQVVDKQGNIARRPVKVGINNNVNAQIISGVLAGEKVIVSQA 379
               +G +V V+D+Q    RRP++ G   +    +  GV AGE VIV  A
Sbjct: 308 QQDQQGSYVLVLDQQNRAQRRPIEPGPQLDQVIAVPKGVQAGETVIVGGA 357