Pairwise Alignments

Query, 397 a.a., efflux RND transporter periplasmic adaptor subunit from Serratia liquefaciens MT49

Subject, 380 a.a., hemolysin D from Cupriavidus basilensis FW507-4G11

 Score =  110 bits (276), Expect = 5e-29
 Identities = 100/369 (27%), Positives = 163/369 (44%), Gaps = 54/369 (14%)

Query: 13  PTVIVAAIALFLYFRSHDATETPRYITAVAQTRDLEQTVLADGTIEAQKQVSVGAQVSGQ 72
           P    AA+   + F   D  E        A T+DL  ++   G + A  Q SV A+V+G+
Sbjct: 42  PAAPAAAVQDLVEFLPSDLVE--------ATTQDLRVSLPLSGGLRALNQASVKAKVAGE 93

Query: 73  IKALYVALGDKVHKGQRVAEIDDLTQQNALRDAEAALKNVQAQRASKMAALHNNQLVYQR 132
           ++ + V  G+ V  GQ +  ID         + +A +   + Q  +      N++  ++R
Sbjct: 94  VQQVLVREGEAVRAGQVIVRID-------ATEYQAKVTQARGQMLAARGQYENSKQTFER 146

Query: 133 QQAIVARGVGVRADLDSAQATLIATRADINALDAQIIQAQIAVNTAQVNLGYTKITSPID 192
            + +VA+G   +   D+ Q+ L    A+++A       AQ  +  AQ  L  T + SP+D
Sbjct: 147 NRELVAKGFISKTAFDNFQSNLDVAHANLDA-------AQGGLEVAQKALADTIVKSPLD 199

Query: 193 GTIVALPVEEGQTVNAVQSAPTIVKVAQLATMTVEAQISEADVVKVKTGMPVYFTILGEP 252
           G + A  V+ G+ V+       ++ V  L  + +EA I  ADV +V  G  V   +  E 
Sbjct: 200 GLVAARAVQPGEKVS---PDTRLIDVVDLRVLELEAPIPMADVARVAIGQAVQLDV--EG 254

Query: 253 GKRYSTQLRAIEPAPDSINDETTSTSTSTSSSTSSSSTAIYYNGLFDVANPDGALRISMT 312
             R+  +L  I PA                 S  + S  +Y      V NP+  LR  M 
Sbjct: 255 SGRFEGKLVRINPA----------------VSQGTRSIMVYVR----VDNPEARLRAGMF 294

Query: 313 AQVYIVLAKAENAVVIPATALEGD----WVQVVDKQGNIARRPVKVGINNNVN--AQIIS 366
           AQ  +VL      V +P TA+  D    +V  V+    +A R VK+GI ++ +   +I S
Sbjct: 295 AQGALVLGHHAGVVAVPVTAVRNDGERTFVYSVEND-VLAERQVKLGIRDDASGLVEITS 353

Query: 367 GVLAGEKVI 375
           G+  G KV+
Sbjct: 354 GLATGAKVV 362