Pairwise Alignments

Query, 531 a.a., ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 529 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

 Score =  608 bits (1569), Expect = e-178
 Identities = 298/520 (57%), Positives = 376/520 (72%), Gaps = 3/520 (0%)

Query: 12  LLALAAMGGARASTLVYCSESSPEGFNPQLFTSGPTVDASSATIYNRLVDFKTGTVELQP 71
           +LA+AA  GA+A TLVYCSE SPEGFNP  +T+G T DA+S  I+++LV FK GT E++P
Sbjct: 13  ILAMAA-SGAQAKTLVYCSEGSPEGFNPAFYTTGTTFDATSKNIFDKLVLFKRGTTEIEP 71

Query: 72  SLAESWQVSEDGKNYTFHLRKGVKFQSNKYFTPTRDFNADDVIFSFMRQKDANNPYHKVS 131
            LAESW+VS DGK YTFHLRKGV F  +  F PTR FNADDVI+SF RQ   ++PYH VS
Sbjct: 72  GLAESWEVSPDGKTYTFHLRKGVTFHDSDIFKPTRQFNADDVIWSFERQLKKDHPYHAVS 131

Query: 132 NGAYTNFESMEFGTLINNIVKVDDNTVRFELSRAEAPFVADLGMYFATILSAEYADAMLK 191
            G Y  FE M   TL+  I KVDD TV F LSR EAP +A+L M FA+I SAEYAD M+K
Sbjct: 132 GGTYDYFEGMSMNTLLEKIEKVDDYTVVFHLSRPEAPMLANLAMDFASIFSAEYADKMMK 191

Query: 192 AGTPQRVDNDPIGTGPFQLVQYQKDAKILYKAFDHYWEGKPKVDRLVFSITPDAAVRYAK 251
           AGTP+ VD  PIGTGPF    YQKDA+I Y+A   YW+GK  +DRLVF ITPDA+VRYAK
Sbjct: 192 AGTPEVVDQKPIGTGPFMFRGYQKDAQIRYEANPTYWQGKAAIDRLVFVITPDASVRYAK 251

Query: 252 LQKNECQVMPFPNPADLTRMRQDPNIQVMEKSGLNIGFLAFNTQKKPLDNVKVRQALALA 311
           L+  EC VMP+PNPADL  M+ D  + +M + GLN+G+LA+N +KKP D+V+VR+AL LA
Sbjct: 252 LKAGECHVMPYPNPADLEAMKTDKAVNLMHQEGLNVGYLAYNVEKKPFDDVRVRKALNLA 311

Query: 312 VNKPAILEAVFHGAGQPAKNLLPPTQWGSNDKIEDYPYSPEKAKKLLQEAGLGQGFAIDL 371
           ++K AI++AV+ GAG  A N +PPT W  N  ++D  + P  AKKLL EAG+ +     +
Sbjct: 312 IDKKAIIDAVYQGAGTAATNPIPPTIWSYNKAVKDDAFDPAAAKKLLAEAGV-KDLKTTI 370

Query: 372 WAMPVQRPYNPNAKRMAEMIQSDWAKIGVKAKIVTFEWGEYLQRIKNGEHQTALMGWTTA 431
           WAMPVQRPYNPNA+RMAE++Q++W  +GV A+I ++EWGEYL+R K GEH+TAL GWT  
Sbjct: 371 WAMPVQRPYNPNARRMAEILQANWKAVGVDAEITSYEWGEYLKRAKAGEHETALFGWTGD 430

Query: 432 NGDPDNFFGPLFTCVSANGGSNSAKWCYPPFDKLISQAREENDHAKRVAMYEQAQVMMHD 491
           NGDPDNF   L  C  A  G+N A+WC   F+ LI +A+      +RV +YE+AQV+  +
Sbjct: 431 NGDPDNFLAVLLGC-DAIPGNNYARWCDKSFENLIQKAKIATSQEERVKLYEEAQVIFKE 489

Query: 492 QMPALMIAHSTIFEPVRKEVKGYEIDPFGKHIFKQVSLEK 531
           Q P   IAHS ++EP+RKEV  Y+IDP G HIF  V L+K
Sbjct: 490 QAPWATIAHSVVYEPIRKEVIDYKIDPLGGHIFYGVDLKK 529