Pairwise Alignments

Query, 244 a.a., response regulator transcription factor from Serratia liquefaciens MT49

Subject, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  113 bits (282), Expect = 4e-30
 Identities = 74/248 (29%), Positives = 129/248 (52%), Gaps = 19/248 (7%)

Query: 3   AIIVEDEFLAQEELSYLIKK-HSNIVIEATFDDGLDVLKYLQNHQVDAIFLDINIPSLDG 61
           A++ +DE L +  L+ L+ +    + I A+ ++G   L+ ++ HQ D +FLDI +P +DG
Sbjct: 8   AVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDG 67

Query: 62  VLLAQNISKFAHRPSIVFITAYKEHAVEAFEIEAFDYILKPYHEARIVTMLQKLE----- 116
           + +A+ + +    P +VFITAY E+AV AFE  A DY+LKP   +R+ +  +KL+     
Sbjct: 68  IEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRR 127

Query: 117 --ALHNRPANLPEQASAPNRSSHS-----INLIKDERIIVTDINDIYYAAADEKVTRVY- 168
             A  N  A L  Q     R+        +   K E I +  +N++ Y  A++K   +Y 
Sbjct: 128 NVAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLYK 187

Query: 169 ---TRREEFVMPMNITEFYGRLPEEHFFRCHRSYCVNLSKIREIVPWFNNTYILRLSDLD 225
                  E+++  ++ E   +L    F++ HRS  VN+ KI ++   F     + +  L 
Sbjct: 188 VHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVHIDRL- 246

Query: 226 FEVPVSRS 233
            ++PVSR+
Sbjct: 247 -QLPVSRA 253