Pairwise Alignments

Query, 257 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 266 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score =  152 bits (383), Expect = 9e-42
 Identities = 89/243 (36%), Positives = 127/243 (52%)

Query: 15  PRPVQFRCEEFNARTEFQPHRHSWGQLMWVKAGVMVLRIGGQRFLAPPEFVLWAPAEIEH 74
           PRP+  R E    RT    H H W QL +  +GV+ +     RFLAPP+  +  P  + H
Sbjct: 21  PRPLFARSESLAERTTTPRHNHPWAQLSYAISGVLRVHTERGRFLAPPQRAILIPPGLLH 80

Query: 75  SCYNQRLAQCRMVDIALPLCAGLPEEPCLVSVTPIFRAIAEDFYARKQYIPQSKQDLRLC 134
              +    + R + I   +    P    +++V+P+ R +   F        +   D RL 
Sbjct: 81  EVISSPQTEMRSLYIDQRVVPWAPAHCQVLAVSPLLRELIRTFGTLPVDYDEQGADGRLA 140

Query: 135 RALIDQLHVSPVQQTYLPTSEDKFLAPVLEALEHCPSDNTSLAIWATRVYTTERTLSRRC 194
             ++DQL  +P     LP  +D  L  + EAL   P  + SLA W+ R++ +E+TL+R+ 
Sbjct: 141 AVILDQLRAAPELSYSLPWPDDARLRGICEALYEQPDLSLSLAQWSERLHISEKTLTRQF 200

Query: 195 QQDLGMSFSEWRQRLRFLHAVSLLEQGKTVQEVALEVGYSSASAFIVMFQQIAGTTPERF 254
           Q+D G+SF  WRQRLR L A+ LLE+G+ V +VAL  GY S SAFI  F Q  GTTP   
Sbjct: 201 QRDTGLSFRAWRQRLRLLSALPLLERGQPVTDVALACGYESTSAFIAAFGQQFGTTPGAL 260

Query: 255 RRA 257
            RA
Sbjct: 261 ARA 263