Pairwise Alignments

Query, 257 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  217 bits (552), Expect = 2e-61
 Identities = 105/241 (43%), Positives = 152/241 (63%)

Query: 15  PRPVQFRCEEFNARTEFQPHRHSWGQLMWVKAGVMVLRIGGQRFLAPPEFVLWAPAEIEH 74
           P  V    E F + TE + H H WGQ+  +  G++ +     RFLAPP   +W PA I H
Sbjct: 18  PSDVFMNFEAFLSNTETREHSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRH 77

Query: 75  SCYNQRLAQCRMVDIALPLCAGLPEEPCLVSVTPIFRAIAEDFYARKQYIPQSKQDLRLC 134
             YN++  +   ++IA  L    P +  L+ VT I  AI +DF  R   + QS +D RL 
Sbjct: 78  RSYNRKPIEYCSLNIASQLTTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSCEDKRLV 137

Query: 135 RALIDQLHVSPVQQTYLPTSEDKFLAPVLEALEHCPSDNTSLAIWATRVYTTERTLSRRC 194
           + L+DQL     Q  +LP++  K+LAP+L  +E  P+DNT+L  WA +V+TTERTL+R C
Sbjct: 138 QVLLDQLATRETQHHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHC 197

Query: 195 QQDLGMSFSEWRQRLRFLHAVSLLEQGKTVQEVALEVGYSSASAFIVMFQQIAGTTPERF 254
           Q +LGMSF+EWR R+R+L+++ LL QG  V+EVAL +GY+ AS FI MF++ +G TPE++
Sbjct: 198 QAELGMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQY 257

Query: 255 R 255
           +
Sbjct: 258 K 258