Pairwise Alignments

Query, 257 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 274 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  131 bits (329), Expect = 2e-35
 Identities = 78/241 (32%), Positives = 126/241 (52%), Gaps = 4/241 (1%)

Query: 16  RPVQFRCEEF-NARTEFQPHRHSWGQLMWVKAGVMVLRIGGQRFLAPPEFVLWAPAEIEH 74
           RP   R  +F + + E   H H  GQL+    G +      + ++ PP   +W P  + H
Sbjct: 18  RPAVARQLDFADHQAEVPMHEHRKGQLILALHGAVTCTADNEIWIVPPNCAVWIPGGVPH 77

Query: 75  SCYNQRLAQCRMVDIAL-PLCAGLPEEPCLVSVTPIFRAIAEDFYARKQYIPQSKQDLRL 133
           S   +  A  R+  + + P  A LPEE C +S++P+ R + +         P      RL
Sbjct: 78  SA--RATANARLTYLFVEPGAAKLPEECCTLSISPMIREMVDRLAREPADYPSHGHAARL 135

Query: 134 CRALIDQLHVSPVQQTYLPTSEDKFLAPVLEALEHCPSDNTSLAIWATRVYTTERTLSRR 193
            R  +D+L   P ++  LP S +  +  + +AL   PSD ++LA WA RV  +ER+L+R 
Sbjct: 136 ARVALDELVDMPRERFNLPISGNAKIRAIADALTVDPSDRSTLAEWAKRVAMSERSLARL 195

Query: 194 CQQDLGMSFSEWRQRLRFLHAVSLLEQGKTVQEVALEVGYSSASAFIVMFQQIAGTTPER 253
             ++ G++F  WRQ+L  + A+  L  G +V  VA E+GY S +AFI MF++  G+TP +
Sbjct: 196 MIRETGLTFGRWRQQLHLVVALRQLAGGASVHTVAAELGYESVNAFITMFKKALGSTPAQ 255

Query: 254 F 254
           +
Sbjct: 256 Y 256