Pairwise Alignments

Query, 273 a.a., tRNA pseudouridine(38-40) synthase TruA from Serratia liquefaciens MT49

Subject, 274 a.a., pseudouridine synthase from Pseudomonas fluorescens FW300-N2E3

 Score =  292 bits (747), Expect = 6e-84
 Identities = 144/259 (55%), Positives = 183/259 (70%), Gaps = 1/259 (0%)

Query: 13  KIALGIEYDGSRYYGWQRQQE-VASVQACLEQALSKVANAPINVLCAGRTDAGVHATGQV 71
           +IALG+EY GSRY GWQRQ   VA+VQ  LE ALSKVA++P+++ CAGRTDAGVHA GQV
Sbjct: 8   RIALGVEYKGSRYRGWQRQASGVATVQLALETALSKVADSPVSLHCAGRTDAGVHACGQV 67

Query: 72  VHFETTAQRKDAAWTMGVNTHLPPDIAVRWVTGVPEDFHARFSATARRYRYIIYNHRYRP 131
           VHF+T   R   AW MG N +LP DI+V W   +P  FHARF A ARRYRY+IYN + RP
Sbjct: 68  VHFDTQVDRSLKAWVMGANINLPHDISVSWAKVMPAHFHARFKAIARRYRYVIYNDQIRP 127

Query: 132 AVLQQGMTHFYHPLDADRMERAAQALLGENDFTSFRAVQCQSRTPWRNVKHVKVTRHGEY 191
           A L + +T  + PLD  RM  AAQ L+G +DF++FRA QCQ+++P + + H++VTRHG+ 
Sbjct: 128 AHLNEEVTWNHRPLDVQRMAEAAQHLIGTHDFSAFRAGQCQAKSPIKEIHHLRVTRHGKM 187

Query: 192 IVVDIKANAFVHHMVRNIVGSLMEIGCGNQDENWMAELLALKDRNLAAATARAEGLYLVS 251
           IV+DI+A+AF+HHMVRNI G LM IG G +   W  E+L  + R     TA   GLYLV 
Sbjct: 188 IVLDIRASAFLHHMVRNIAGVLMTIGAGERPVEWAKEVLESRVRRTGGVTAHPFGLYLVQ 247

Query: 252 VDYPEHFALPRPPMGPLFL 270
           V+Y + F LP   +GP FL
Sbjct: 248 VEYRDEFELPERYIGPHFL 266