Pairwise Alignments

Query, 585 a.a., DEAD/DEAH box helicase family protein from Serratia liquefaciens MT49

Subject, 813 a.a., type III restriction protein res subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 52.0 bits (123), Expect = 9e-11
 Identities = 85/366 (23%), Positives = 149/366 (40%), Gaps = 45/366 (12%)

Query: 5   LRPYQLEAVEATIKHFRQHPQPALIVLPTGAGKSLVIAELAKRARGRVLVLAHVKELVAQ 64
           LR  Q  A +A  +H        ++   T  GK++V + L        LVL H +EL+ Q
Sbjct: 452 LRQQQSRAFDALAEH-----DTGVLAATTAFGKTVVASALIAHRARNTLVLVHRRELLNQ 506

Query: 65  NHAKYRAYGLEAD---IFAAGLQQKDSAGKVVFGSVQSVARNLSLFD--GAFSLLIIDEC 119
              +  ++ L+ D   I   G  ++   G +    +QS+ R   + D    +  L++DEC
Sbjct: 507 WVERLGSF-LQIDPKLIGTIGAGKRKLTGVIDVALIQSLVRKGEVDDIVADYGHLVVDEC 565

Query: 120 HRISDDDESQYQQIIQHLQKTNPQLRLLGLTATPYRLGKGWIYQYHYHGFTRGDASSLFR 179
           H +S           + + + +    + GL+AT  R        +   G  R   S+  +
Sbjct: 566 HHLSAAS-------FELVARRSKARYVAGLSATVARKDGHHPIIFMQCGPVRHQVSA--K 616

Query: 180 DCIYELPLRYMIKNGY--------LVPPERLDMPIVQYDFSRLEARSNGLFSEVDLNREL 231
               E  LR+  +  +        L   ER  MP +    +  EAR++ +F +V  + E 
Sbjct: 617 SQAAESGLRHRARERHTRFRLPEPLAMAERPSMPAIYAALAEDEARNDLIFDDVLKSLEA 676

Query: 232 KQQNRITPHIISQIVEYAE-TRKGVMIFASTVEHAREVHGLLPSGEAALVSAETPAAERD 290
           K+    +P I+++  ++ E   +    FA  +        +L  G    +SA+   A   
Sbjct: 677 KR----SPIILTERKDHLEHLHQRFSRFAKNIV-------VLRGG----MSAKDRKAAHA 721

Query: 291 ALIEAFKQQQLRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKED 350
           AL     +++L  L     +  GFD   +D + +  P        Q VGR  R    K+D
Sbjct: 722 ALNVDDDEERL-ILATGRYIGEGFDDARLDTLFLTMPIAWKGTLAQYVGRLHRRHDDKKD 780

Query: 351 CLILDY 356
            L++DY
Sbjct: 781 VLVVDY 786