Pairwise Alignments

Query, 585 a.a., DEAD/DEAH box helicase family protein from Serratia liquefaciens MT49

Subject, 1167 a.a., type I restriction enzyme EcoKI subunit R (RefSeq) from Shewanella sp. ANA-3

 Score = 74.3 bits (181), Expect = 3e-17
 Identities = 93/405 (22%), Positives = 164/405 (40%), Gaps = 87/405 (21%)

Query: 5   LRPYQLEAVEATIKHFRQHPQPALIVLPTGAGKSLVIAEL------AKRARGRVLVLAHV 58
           LR YQ++A+EA      Q+ + AL+ + TG GK+  I  L      A+R + RVL L   
Sbjct: 445 LRDYQIKAIEAVESVLSQNVRSALLAMATGTGKTRTIIGLIYRFLKAERFK-RVLFLVDR 503

Query: 59  KELVAQNHAKYRAYGLEADIFAAGLQQKDSAG--------KVVFGSVQSVARNLSLFDGA 110
             L  Q    ++   LE ++  +G+      G        ++   +VQ++ + + + D  
Sbjct: 504 FALGDQAQNDFKEVSLEQNLSLSGIYNIAELGDMAAEAETRIQVSTVQAMVKRVFMSDNP 563

Query: 111 -----FSLLIIDECHR------------ISDDDESQYQQIIQHLQKTNPQLRLLGLTATP 153
                F  +I+DE HR            I+  D +QY    + +      +++  LTATP
Sbjct: 564 PPLDQFDCIIVDEAHRGYTLDQEMTEGEIATRDAAQYLSSYRRVLDYFDAVKI-ALTATP 622

Query: 154 YRLGKGWIYQYHYHGFTRGDASSLFRDCIYELPLRYMIKNGYLV---PPERLDMPIVQYD 210
            +                   S +F   +Y    R  +   +L+   PP R +  + Q  
Sbjct: 623 AK-----------------HTSEIFGKPVYTYSYREAVAEDWLIDHEPPIRYETLLTQNG 665

Query: 211 FSRLEARSNGLFS-----------EVDLNRELKQQNR----------ITPHIISQIVEYA 249
            S  +  +    +           E +LN E++  NR          I   ++ ++  + 
Sbjct: 666 ISFTKGETVSAINTQTGEIESAELEDELNFEVEAFNRCVINENFNKVICEQLVQELDPFG 725

Query: 250 ETRKGVMIFASTVEHAREVHGLLPSGEAALVSAETPAA-------ERDALIEAFKQQQLR 302
           + +   +IF +T  HA  V  LL     A+ + E   A       + D + +  KQ +  
Sbjct: 726 DEK--TLIFCATDLHADMVKRLLDDAFKAIYNGEYNQAAVAKITGQSDKVNQLIKQYKNE 783

Query: 303 YLVNVAV----LTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLR 343
              N+A+    LTTG D P +  +  +R  +S  LY+Q++GR  R
Sbjct: 784 RYPNIAITVDLLTTGIDVPKICNLVFMRRVKSRILYEQMIGRATR 828