Pairwise Alignments

Query, 585 a.a., DEAD/DEAH box helicase family protein from Serratia liquefaciens MT49

Subject, 590 a.a., type III restriction enzyme, res subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  620 bits (1600), Expect = 0.0
 Identities = 316/584 (54%), Positives = 405/584 (69%), Gaps = 9/584 (1%)

Query: 4   TLRPYQLEAVEATIKHFRQHPQPALIVLPTGAGKSLVIAELAKRARGRVLVLAHVKELVA 63
           TLR YQ +AV+A I HF++    A++VLPTGAGKS+VIAELA+ ARGRVLVL HVKELVA
Sbjct: 10  TLRDYQQQAVDAAIAHFKKSTDSAVLVLPTGAGKSIVIAELARIARGRVLVLTHVKELVA 69

Query: 64  QNHAKYRAYGLEADIFAAGLQQKDSAGKVVFGSVQSVARNLSLFDGAFSLLIIDECHRIS 123
           QN  K      EA I++AGL QK + GK V  SVQS AR L+ FD  FSL+IIDECHR+S
Sbjct: 70  QNAQKVGLLTTEASIYSAGLNQKSTDGKTVVASVQSAARALNQFDEPFSLVIIDECHRVS 129

Query: 124 DDDESQYQQIIQHLQKTNPQLRLLGLTATPYRLGKGWIYQYHYHGFTRGDASSLFRDCIY 183
            +  SQYQQI+ HLQ+ NP+LRLLGLTATPYRLG GWIY+ HYHG        +F  CI+
Sbjct: 130 LEKTSQYQQILSHLQQRNPKLRLLGLTATPYRLGTGWIYKRHYHGKVGSPELGIFEQCIF 189

Query: 184 ELPLRYMIKNGYLVPPERLDMPIVQYDFSRLEARSNGLFSEVDLNRELKQQNRITPHIIS 243
           ELP+R +IK GYL  P   D    QYDFS+++   NG + E  +N  L    R T  I+ 
Sbjct: 190 ELPIRPLIKQGYLTAPTLFDGLSAQYDFSQIKPNDNGEYPEAQVNALLNHAGRATTAIVK 249

Query: 244 QIVEYAETRKGVMIFASTVEHAREVHGLL---PSGEAALVSAETPAAERDALIEAFKQQQ 300
           Q++E +  R+G++IFA+TV HA E+   L    S + A+V+A+TP  ERD LI+ FK ++
Sbjct: 250 QLIELSHHRQGIIIFAATVRHAEEIVSQLNKEHSEQTAIVTAQTPDNERDELIKRFKARE 309

Query: 301 LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKEDCLILDYAGNP 360
           L++LVNVAVLTTGFDAPHVDLIAILRPT SVSL+QQ++GRGLR+   K+DCL++DYA N 
Sbjct: 310 LKFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMIGRGLRICESKKDCLVIDYAANG 369

Query: 361 HDLFTPEVGVSKPHSDSQPVQVFCPGCGFANLFWGKCTENGDIIEHYGRRCQGWLEDDEG 420
           +DL+ PEVG +KP+S S PVQV CP C FAN+FWG    +GDIIEH+GRRCQG +E   G
Sbjct: 370 YDLYFPEVGQAKPNSKSVPVQVHCPVCQFANIFWGLTDNDGDIIEHFGRRCQGIVE-HHG 428

Query: 421 HREQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKAALKLKDALVLRCGGME 480
            ++QCD+RFR KSCP CG ENDIAAR C  CQ  L+DPD  LK  L  +   + RC  M 
Sbjct: 429 QKQQCDFRFRSKSCPDCGQENDIAARICQHCQSTLIDPDKRLKQVLNKQHHHLFRCQHMT 488

Query: 481 LQSGRDEKGEWLKATYYDEDGTSTSERFRLQTPAQRKAFDMLFLRPHQRAPGV-PFAWQN 539
           L    D+ G+ LK  Y D +G   + RF+LQTPAQ +A   LF+ PH R PG+ P  ++N
Sbjct: 489 L---LDDAGD-LKVQYLDIEGNEFNRRFKLQTPAQWRALYALFIFPHSRTPGLKPKQYKN 544

Query: 540 AADVLAKQALLRHPDFVVARKRGQFWQVREKVFDYQGRFRRANE 583
            ++++A     R PD ++ +K  + W + E  FDYQGR++  N+
Sbjct: 545 VSELIADSTAFRMPDLLLLKKHKKGWDLLESYFDYQGRYQTENK 588