Pairwise Alignments

Query, 585 a.a., DEAD/DEAH box helicase family protein from Serratia liquefaciens MT49

Subject, 1138 a.a., type III restriction enzyme, res subunit (RefSeq) from Shewanella sp. ANA-3

 Score = 72.4 bits (176), Expect = 1e-16
 Identities = 103/394 (26%), Positives = 157/394 (39%), Gaps = 82/394 (20%)

Query: 6   RPYQLEAVEATIKHFRQHPQPALIVLPTGAGKSLVIAELAKRARG-----RVLVLAHVKE 60
           R YQLE +    + F    + AL+V  TG GK+ V   LAK         R+L L   KE
Sbjct: 362 RRYQLETISRVHETFELKRRKALVVQATGTGKTRVSIALAKSLMDAKWVKRILFLCDRKE 421

Query: 61  LVAQ-NHAKYRAYGLEADIFAAGLQQKDSAGKVVFGSVQSVARNLSLFD-GAFSLLIIDE 118
           L  Q + A  +  G++  +     ++     +V   +   +      FD G F L+I DE
Sbjct: 422 LRKQADKAFVQFLGVKPYVVGKSDKKYKDTARVFIATYPGMMGIYEDFDVGYFDLIIADE 481

Query: 119 CHRISDDDESQYQQIIQHLQKTNPQLRLLGLTATPYRLGKGWIYQYHYHGFTRGDASSLF 178
            HR           +  +L K    L+ +GLTATP  +                   +LF
Sbjct: 482 SHR-------SIYNVFGNLFKYFDCLQ-VGLTATPVEM-------------VSRSTCNLF 520

Query: 179 RDCIYE-----LPLRYMIKNGYLVPPERLDM------------PIVQYDFSRLEARSNG- 220
            DC Y+      PL   I  G+LVP E + M             +     + LEA+    
Sbjct: 521 -DCDYKEPTANYPLEKAIGEGHLVPFEIVTMTTKFMREGMNQRSLSDEQIAELEAQGEDP 579

Query: 221 ---LFSEVDLNREL--KQQNRITPHIISQIVEYAETRKG------VMIFASTVEHAR--- 266
               F   +++  +  K  NR    I+  ++E     K        +IFA  + HAR   
Sbjct: 580 NEFEFESAEIDNAVLNKDTNR---KILRNLMENGIKDKDNQLIGKSIIFARKINHARLLK 636

Query: 267 ----EVHGLLPSGEAALVSAETPAAERDALIEAFK------------QQQLRYLVNVAVL 310
               E++  L  G   ++ +E P AE  ALI+ FK               +   ++V +L
Sbjct: 637 ELFDEMYPELSQGFCEVIHSEEPRAE--ALIDQFKITEEEKAKDSSLPDPITLAISVDML 694

Query: 311 TTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRL 344
            TG D P V  +   +P +S   + Q++GRG RL
Sbjct: 695 DTGIDVPSVVNLVFAKPVKSKVKFWQMIGRGTRL 728