Pairwise Alignments

Query, 360 a.a., iron ABC transporter permease from Serratia liquefaciens MT49

Subject, 312 a.a., Fe3+ ABC transporter, permease (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  165 bits (418), Expect = 1e-45
 Identities = 97/307 (31%), Positives = 170/307 (55%), Gaps = 11/307 (3%)

Query: 52  GPSGLSLSSLWQTLIDPAAADAGTRVIVWDIRLPYALMAVVVGFALGLAGAEMQTILNNP 111
           G + + +  +W  L      D  TR I+  IR    ++A ++G AL ++G +MQT+  NP
Sbjct: 4   GDTYIPIPKVWAVLTG-GECDEMTRNILLSIRFIRVVVAGLIGIALSVSGLQMQTVFQNP 62

Query: 112 LASPFTLGVSSAAAFGAALAIVLGIGVPGIPDQWFISANAFIFA--LFAALMLDGITRWT 169
           LA P+ LGVSS A  G AL  +LG  + G  D   + +   + +  +  A++L G+   +
Sbjct: 63  LADPYLLGVSSGAGLGVAL-FILGAPLLGWADFPLLQSAGIVGSGWIGTAVILLGVAIIS 121

Query: 170 RVATS--GVVLFGIALVFTFNALVSMMQFIASEDTLQGLVFWTMGSLARASWDKLGILLG 227
           R   +  GV++ G+ + +   A++ ++Q+++S + L+    W+MGSL+  +  +L I++ 
Sbjct: 122 RKVKNILGVLIMGVMIGYVAGAIIQILQYLSSAEQLKMFTLWSMGSLSHITAGQLSIMIP 181

Query: 228 VFVVLLPLSMMSSWKLTALRLGEDRAVSFGIDVRRLRLTTLLRISILSALAVAFVGPIGF 287
           V  + L LS+     L  L LGE+ A + G+ ++R R    +  ++L+    AF GP+GF
Sbjct: 182 VVCIGLLLSVACIKSLNLLLLGENYARTMGMSIKRSRTLVFISTALLTGTVTAFCGPVGF 241

Query: 288 IGLVAPHIARMIF-GEDHRFYLPASALIGALVLSMASVASKNLIPGIIIPVGIVTSLVGV 346
           IGL  PHI R++F   DHR  +P + L G + + +  + +K      ++PV  +T+L+GV
Sbjct: 242 IGLAVPHITRLLFDNADHRILMPGTMLTGLIAMLICDIIAKK----FLLPVNCITALLGV 297

Query: 347 PFFLSII 353
           P  L +I
Sbjct: 298 PVILWVI 304