Pairwise Alignments

Query, 360 a.a., iron ABC transporter permease from Serratia liquefaciens MT49

Subject, 326 a.a., Fe3+ ABC transporter, permease protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  181 bits (460), Expect = 2e-50
 Identities = 108/328 (32%), Positives = 183/328 (55%), Gaps = 14/328 (4%)

Query: 32  LMMGVLALAIMGSLLLDFTMGPSGLSLSSLWQTLIDPAAADAGTRVIVWDIRLPYALMAV 91
           ++  +L    +G  LLD  +G   + +  +W  L     + A T  IV +IRL  A++A+
Sbjct: 7   ILFSILITLTVGLFLLDLAVGAVNIPIRDVWAALTGGNCSRA-TEKIVLNIRLIKAIVAL 65

Query: 92  VVGFALGLAGAEMQTILNNPLASPFTLGVSSAAAFGAALAIVLGIGVPGIPDQWFISANA 151
           + G AL ++G +MQT+  NPLA P+ LG+SS A+ G AL ++ GIG         I+  A
Sbjct: 66  LAGAALSVSGLQMQTLFRNPLAGPYVLGISSGASLGVALVVLAGIG-----SSIGIAGAA 120

Query: 152 FIFALFAALMLDGITRWTRVATSGVVLF-GIALVFTFNALVSMMQFIASEDTLQGLVFWT 210
           ++ A    L++  + +  R+    V+L  G+       A+V ++Q+++ E++L+  V WT
Sbjct: 121 WVGAAVVLLVITAVGQ--RIKDIMVILILGMMFSSGVGAVVQILQYLSKEESLKAFVIWT 178

Query: 211 MGSLARASWDKLGILLGVFVVLLPLSMMSSWKLTALRLGEDRAVSFGIDVRRLRLTTLLR 270
           MG+L   +  +L IL+      L L++++   L  L  GE+ AV+ G+++RR R    L 
Sbjct: 179 MGALGDVTSGQLLILVPSVFAGLLLAVLTIKPLNLLLFGEEYAVTMGLNIRRSRSLLFLS 238

Query: 271 ISILSALAVAFVGPIGFIGLVAPHIARMIF-GEDHRFYLPASALIGALVLSMASVASKNL 329
            ++L+    AF GPIGFIGL  PH+ RM+F   DH   LP + L GA +L +  + SK  
Sbjct: 239 TTLLAGTITAFCGPIGFIGLAMPHVTRMLFQNSDHHVLLPGTILSGASILLLCDIISKI- 297

Query: 330 IPGIIIPVGIVTSLVGVPFFLSIILRHR 357
                +P+  +T+L+G+P  + ++LR++
Sbjct: 298 ---FTLPINAITALLGIPIVVWVVLRNK 322