Pairwise Alignments

Query, 428 a.a., high-affinity branched-chain amino acid ABC transporter permease LivM from Serratia liquefaciens MT49

Subject, 418 a.a., ABC-type branched-chain amino acid transport system, permease component from Pseudomonas stutzeri RCH2

 Score =  417 bits (1073), Expect = e-121
 Identities = 224/414 (54%), Positives = 281/414 (67%), Gaps = 17/414 (4%)

Query: 15  SLLDAVLAGLIALIVFGPIVGIVLNGYSFNFEPHRL----VWIIAVVMAGRLLLSLFLQT 70
           +L  A  + L+ + V  P+ G+ L       E H       WIIA       +  LF   
Sbjct: 4   NLRTAFFSALLVIAVAVPVFGLKLTTVGIRVEVHGAEIGTFWIIAACAVAMFVWQLF--- 60

Query: 71  TPGRKLLTRFDGGNDGVYVRPIGARNSL------RWIIPLMAVIALLFPFVATKYLLTVA 124
              R  L      +  +   P GA N L      RWII  + ++AL++PF  ++  + +A
Sbjct: 61  ---RTHLAAGWAASPSLPTVPAGAGNFLTLPSTQRWIILALVLVALVWPFYGSRGAVDIA 117

Query: 125 ILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWAMLPLGALMA 184
            L LIYV+LGLGLNIVVGLAGLLDLGYV FYA+GAY  AL   Y G+GFW  LP+   MA
Sbjct: 118 TLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYTYALLSHYYGVGFWTALPIAGAMA 177

Query: 185 ALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWMSLTGGPNGVS-VPAPTIFGLEF 243
           AL G LLGFPVLR+ GDYLAIVTLGFGEIIR++L N  S+TGGPNG+S +  PT+FGL F
Sbjct: 178 ALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRNMTSVTGGPNGISGIDKPTLFGLSF 237

Query: 244 GRRAKDGGVPIHEFLGITYNPNLKFIFIYAVLFLVVLLVLYIKHRLTRMPIGRAWEALRE 303
            RRA +G    HE+ G+ YN   K IF+Y +  L+VLL L++ +RL RMPIGRAWEALRE
Sbjct: 238 DRRAAEGMQTFHEYFGVAYNSVNKVIFLYLIALLLVLLTLFVINRLLRMPIGRAWEALRE 297

Query: 304 DEIACRSLGLNHVLVKLSAFMMGASTAGLAGVFFATYQGFVNPTSFTFFESALILAIVVL 363
           DEIACR+LG+N  ++KLSAF +GA+ AG AG FFA  QG V+P SFTF ESA+ILAIVVL
Sbjct: 298 DEIACRALGMNPTVIKLSAFTLGATFAGFAGSFFAARQGLVSPESFTFIESAIILAIVVL 357

Query: 364 GGMGSTIGVVLAAFVLTVAPELLRSFAEYRVLLFGVLMVAMMIWRPRGLVRISR 417
           GGMGS +GV+LAA V+ + PEL+R F+EYR+L+FG LMV MMIWRP+GL+ + R
Sbjct: 358 GGMGSQLGVILAAIVMILLPELMREFSEYRMLMFGALMVLMMIWRPQGLLPMQR 411