Pairwise Alignments

Query, 467 a.a., efflux transporter outer membrane subunit from Serratia liquefaciens MT49

Subject, 469 a.a., multidrug transporter from Burkholderia phytofirmans PsJN

 Score =  394 bits (1011), Expect = e-114
 Identities = 220/476 (46%), Positives = 297/476 (62%), Gaps = 29/476 (6%)

Query: 10  ATATLTGCSLTPDYQRPAAPVAPAYPDYGVAQVDGTAAAI------------------GW 51
           A A L GC+L P Y+RPAAPVA AYP     +   TAAA                    W
Sbjct: 4   ALAVLAGCTLDPHYERPAAPVAVAYPQGDAYESTSTAAATVAKSASATVVVPPLAVDTAW 63

Query: 52  REFYRDPLLQTLITQALTNNRDLRIAALNVEAARASYRIQRADTLPTLAAQGSGSVQRTP 111
           R F+RD  LQ LI  AL NNRDLR+AALNV    A YRI RA   P+++A GS + +RT 
Sbjct: 64  RSFFRDERLQRLIEIALANNRDLRVAALNVAEYEAQYRITRAALAPSISASGSLTRERTQ 123

Query: 112 GRLSAGGQSAVGRSYQVGGALSWELDLFGRLRSLNQQALELYLAQDETRAAAQLALIAET 171
           G  S+     VG +       SWE+D FGRLRSL +QALE YLA D +R + Q++LIA  
Sbjct: 124 GVTSSVSDLNVGTT-------SWEIDFFGRLRSLKRQALENYLATDASRQSTQISLIATV 176

Query: 172 ANAYLSLRADSELLALAQETLSSQQAAFGLVEQSFQLGVATELDRSQAEVGVRTAQRDLA 231
           A  YL+L +D  LL L ++T+ + Q+ + + ++  +LG ++ LD  QAE  + +A+  LA
Sbjct: 177 ATDYLTLLSDERLLQLTEDTVKADQSTYDVTKRVQELGNSSLLDVQQAENSLASAKASLA 236

Query: 232 QYRRQVRQDTNALTLLVGQPLGSAMSSRLAQASTLPDDLLPETIPAGLPADLLTRRPDIR 291
            YRR V QD N L  ++G P+       L  A +  D+ +   I AG+P+ LLTRRPDI 
Sbjct: 237 SYRRAVAQDRNNLIAILGAPI----PDDLPPARSFDDESMFADIGAGVPSLLLTRRPDIV 292

Query: 292 AAEHQLRAANANIGAARAAFFPTLSLTGFGGTASAGLDGLFSAGSGAWSFVPQLSLPIFS 351
            AEH L+AANANIGAARAAFFP + LT   GT+S+ L  LF AG+GAW+F P +S+PIF 
Sbjct: 293 QAEHALKAANANIGAARAAFFPKIELTATAGTSSSTLSSLFKAGTGAWAFAPSVSVPIFD 352

Query: 352 GGSLRAGLDLAEVQKRIEVARYEQAIQQGFRETADVLAGRDTLDEQIRAQTQLVAANQRA 411
            GS +A LD+A+++K+IEVA YE  IQ  F+E ++ L  R T  +Q+ A  + VA++QR 
Sbjct: 353 YGSNKASLDVAKIEKQIEVADYESTIQTAFKEVSNALTARATYVDQVLADREYVASSQRY 412

Query: 412 YALSQQRFQQGVDNYLTVLDSQRSLYAARQVLVDTRLARLTNLVDLYRALGGGWRE 467
           Y L++ R++ G D++LT LD+QR+LY A+Q L    L+R  NLV LY+ L GGW +
Sbjct: 413 YTLAEARYKAGTDSFLTFLDAQRTLYTAQQQLATDTLSRQANLVTLYKVLSGGWEQ 468