Pairwise Alignments

Query, 225 a.a., flagellar hook assembly protein FlgD from Serratia liquefaciens MT49

Subject, 225 a.a., flagellar hook capping protein from Marinobacter adhaerens HP15

 Score =  114 bits (286), Expect = 1e-30
 Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 5/207 (2%)

Query: 19  NAKNNTSQDLSNSFLTLLVAQLKNQDPTNPMQNNELTSQLAQINTVQGIEKLNTTLGSIS 78
           N    TS+   N F+ L++AQLKNQ+P  P +N E  SQLAQ ++++ ++ L+ T+  + 
Sbjct: 22  NGGQGTSELGRNEFMELMLAQLKNQNPLEPQENGEFISQLAQFSSLEEMQNLSGTVEDVV 81

Query: 79  GQINSNQSLQATALIGHGVMVPGSNILAGSKDGKVSTTPFGLELERAADSVTATITDATG 138
           GQ  S Q+LQA+A++G  V+ P    + G+ +G+++ T   +++  +   +  +I    G
Sbjct: 82  GQFRSTQALQASAMVGKTVLAPSQIGILGA-EGEITGT---IQVPASTGGLRLSIEGQNG 137

Query: 139 KAVRTIDLGGLTAGVHSFSWDGSMTDGTTAPDGAYSFTINAK-ANGEQLVARNLHFGMVN 197
           + VR ID+G   AGV SF WDG   +G   P G Y     A   +G Q +   +   + +
Sbjct: 138 ERVRQIDMGSSQAGVVSFRWDGQDGNGNPLPPGPYRIVAEASYPDGPQQLGTMVSANVDS 197

Query: 198 GVIRDANGAKLDLGLAGSATLEDVRQI 224
             +       L+L   GS  L DV+QI
Sbjct: 198 VSLGQGGSITLNLAGMGSIALSDVKQI 224