Pairwise Alignments

Query, 260 a.a., flagellar type III secretion system protein FliR from Serratia liquefaciens MT49

Subject, 251 a.a., flagellar biosynthesis protein FliR from Caulobacter crescentus NA1000

 Score =  100 bits (248), Expect = 4e-26
 Identities = 63/231 (27%), Positives = 120/231 (51%), Gaps = 4/231 (1%)

Query: 22  RILALISTAPVFSEKQISKKVKIGLGGLIVILIAPGLPTSTVPIFSAAGLWLAA--QQIL 79
           R+ A++ T P   ++ I  ++++    L+ +++AP +  +  PI S  G    A   ++L
Sbjct: 19  RVGAMVMTMPGIGDQAIPARIRLSFALLMALILAPLVQNTVGPIPSTLGGLGGAVIHEVL 78

Query: 80  IGVALGLTMQFAFAAIRLAGEVIGMQMGLSFATFFDPSGGPNMPVLARLLNLLAMLLFLS 139
           IG+ +G  ++    ++  AGE+I MQ  LSFA   +PS   +   +A  L++L + L ++
Sbjct: 79  IGLMIGSVLRLFMTSLTTAGEIISMQTTLSFAQSTNPSMEGSSTAVATFLSMLGLTLVMA 138

Query: 140 FNGHLWLISLLVDSFHTLPI-QAEPLNGNGFLALTQAGSLIFINGMMLALPLICLLLTLN 198
            + H   I+ +V S+   P  +A P+N    LA+ Q  +  F  G+ LA P+I   L  N
Sbjct: 139 TDLHHLFIAAIVKSYTIFPFTRAVPVNDAAALAV-QTVAQSFSLGVQLAAPVIVFSLVFN 197

Query: 199 MALGLLNRMTPQLSVFVIGFPVTMTIGIMTIGMMMPMLAPFCEHLFGEFFD 249
           +A GL+ R+ P   +F +  P+++ +G+  + + +  +A      + E  D
Sbjct: 198 LATGLVGRIMPAFQIFFVASPLSVILGLSLLALSLSGIAMVWTDRYRELLD 248