Pairwise Alignments

Query, 429 a.a., flippase from Serratia liquefaciens MT49

Subject, 460 a.a., MATE family efflux transporter from Bifidobacterium breve UCC2003

 Score = 55.8 bits (133), Expect = 3e-12
 Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 27/219 (12%)

Query: 206 GRYLLKVGLPLAVSGLSIVIYTRIDQIMIGNYLGEHSVGLYSAAITLSQGWVFVPIALI- 264
           GR L+K  +P  +S L   +Y  +DQI IG  +G   +G+ +A +T     + + IA + 
Sbjct: 19  GRLLIKFAIPSVLSMLVDALYNIVDQIFIGRGVG--YLGIAAATVTFPFVTILLSIATLL 76

Query: 265 -------TSMMPGVANAGSLSEQEGRIRLLYLVVLLLSMPVILLLSLFPGPIVKLMFGDS 317
                  TSM  G        +  G +  L + + +L   VI L  L P   + L FG +
Sbjct: 77  GIGGSVYTSMNLGAGKEAEAEKTLGTVFTLSVAIGIL-FTVICLTFLKP---LALAFGAT 132

Query: 318 YRETATILALCSVTSLFSVMGTVSYRAIVLFGGYRFIAIKMPLAA----LVNVLMNLVLI 373
                ++  +     +  +    S  AI L    R  A   P+ A    LV  ++NLVL 
Sbjct: 133 KGAQGSLSYVLDYVPIILLGAPFSMAAIALSSMAR--ACGSPILAMGCFLVGAVINLVLD 190

Query: 374 PRY------GILGAAISTLITEFISFFVLNGFF-RKGQI 405
           P Y      G+ GAAI+T+ ++ +S  +L  +F +KG I
Sbjct: 191 PIYIFVFNWGVKGAAIATVTSQIMSAVILLVYFLKKGHI 229