Pairwise Alignments

Query, 354 a.a., lytic murein transglycosylase from Serratia liquefaciens MT49

Subject, 454 a.a., Lytic murein transglycosylase (NCBI) from Rhodospirillum rubrum S1H

 Score =  270 bits (689), Expect = 7e-77
 Identities = 149/353 (42%), Positives = 210/353 (59%), Gaps = 8/353 (2%)

Query: 3   LSAITLLSTLLTLGCTVGQQAMAQGATSVSEASSGTA--TPAAQSRLSETGRDPAQFPAY 60
           L+A+ ++   L+  C    Q+   G T    ++ G A  +P A +       + A F  +
Sbjct: 23  LAALPVVLLALS-SCAGADQSQRSGGTGGGRSAPGMAPVSPIAPAAALSPAAEQAAFAQW 81

Query: 61  VEQLKRQALAQGISPAIVDSAFTDVHFVDRVIKADRNQPEKKITLDDYLKRVLPPAKIAQ 120
           +  ++ +ALA GIS A VDSA        R+++ DR QPE   TL  Y    LP ++IA+
Sbjct: 82  LVGMRAEALAAGISRATVDSALGRARIEPRIVELDRKQPEFNKTLAGYFASTLPDSRIAK 141

Query: 121 GRALYQQYHPKLSRLTAHYGVPGRYVVALWGMESAFGKIQGREDVISALATLAFEGRREA 180
            R +   + P L  L   YGVPGR++VA WG+E+ FG   G   V+ AL+TLAFEGRR A
Sbjct: 142 AREMMALHAPLLRSLEQRYGVPGRFLVAFWGLETNFGGTLGSFRVVDALSTLAFEGRRGA 201

Query: 181 FFSQQLMAALQILEQGHVSREQLKGSWAGAMGQCQFMPTSFLNYAADGDGDGRIDIWNNV 240
           FF  QL+ AL+I++ GHVS + + GSWAGAMGQ QFMP++F  +A D DGDGRIDIW ++
Sbjct: 202 FFRAQLLDALRIIDAGHVSADAMIGSWAGAMGQTQFMPSTFRAHAVDYDGDGRIDIWGSL 261

Query: 241 DDVFASTARYLSSEGWQRGVGWGREVRLPAGFSTEAVGLKDSQAHSVNEWQKRGVRRPDG 300
            D  AS A+YLS  GW+    WG EV LPAG     VGL++ +   + +W   G+R  DG
Sbjct: 262 PDALASAAKYLSDLGWKGAEPWGWEVVLPAGLDLARVGLEERR--PLADWAALGLRGADG 319

Query: 301 SAL---PHSSLRSWLITPDDMQGRAFLVYDNFRTIMHWNRSYYFAIGVGMMAD 350
            AL     + + + L+ P   +G AFLV DN+ +I+ WNRS  +A+ VG++AD
Sbjct: 320 RALGAGARAGVTAALLLPAGYRGPAFLVTDNYFSILKWNRSMLYALAVGLLAD 372