Pairwise Alignments

Query, 269 a.a., ABC transporter ATP-binding protein from Serratia liquefaciens MT49

Subject, 536 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  170 bits (431), Expect = 5e-47
 Identities = 101/253 (39%), Positives = 150/253 (59%), Gaps = 9/253 (3%)

Query: 7   PLLTVEHLTLSLNAEVKVHD----LSFTLHAGERLCLLGASGSGKSLTAAAILGTLPVGA 62
           PLL+V  L +S   + KV +    +SF++  GE + L+G SGSGKS++A + +  L   A
Sbjct: 13  PLLSVRDLRVSFRQDGKVTEAVRGVSFSVGRGETVALVGESGSGKSVSALSTVSLLGDSA 72

Query: 63  TVSGSIRLQGREVNGL---RLQRRKNTELAAIFQDPFTSLNPLTTVGQQLTLALRSQNPL 119
           TVSGS+   G E+ G     L++ +  +++ IFQ+P TSLNPL T+ +QL  +L     L
Sbjct: 73  TVSGSVTYDGTEMVGASERHLRQVRGNDISFIFQEPMTSLNPLHTIEKQLAESLALHQGL 132

Query: 120 TKCQAQHCAAELLTALGM-SPDNVMTRYPNQLSGGQCQRICAALALLGEKSLLIADEPTT 178
               A+    +LL  +G+   +  +  YP+QLSGGQ QR+  A+AL  +  +LIADEPTT
Sbjct: 133 GGAAARERIVDLLNRVGIRDAETRLDAYPHQLSGGQRQRVMIAMALANKPDILIADEPTT 192

Query: 179 ALDMVSQHQLIDILKSYTERPSAPALLFITHDLAVAAGLCQRAIVLVNGEIAEQGSFGRL 238
           ALD+  Q Q++D+L    +      LLFITHDL++   +  R  V+  GEI E G    +
Sbjct: 193 ALDVTIQVQILDLLAD-LKASEGMGLLFITHDLSIVRRIADRVCVMQAGEIVESGPTAEI 251

Query: 239 LQPPQHPYTQQLV 251
              PQHPYT++L+
Sbjct: 252 FANPQHPYTRKLL 264



 Score =  145 bits (365), Expect = 2e-39
 Identities = 87/233 (37%), Positives = 131/233 (56%), Gaps = 8/233 (3%)

Query: 24  VHDLSFTLHAGERLCLLGASGSGKSLTAAAILGTLPVGATVSGSIRLQGREVN--GLRLQ 81
           V+  S ++ AGE L ++G SGSGK+  A AI+  +       G +  QG+++     R  
Sbjct: 309 VNPTSLSVRAGETLGIVGESGSGKTTLALAIMRLI----ASEGRVEFQGQDLRQWSTRDL 364

Query: 82  RRKNTELAAIFQDPFTSLNPLTTVGQQLTLALRSQNPLTKCQAQHCAAELLTALGMSPDN 141
           RR   ++  +FQDPF +L+P  T  Q +   L   N       +   AE+++ +G+ P  
Sbjct: 365 RRLRADMQIVFQDPFGALSPRMTCAQIIAEGLAIHNVDQDRDPRDLVAEVMSEVGLDPA- 423

Query: 142 VMTRYPNQLSGGQCQRICAALALLGEKSLLIADEPTTALDMVSQHQLIDILKSYTERPSA 201
            M RYP++ SGGQ QRI  A A++    L++ DEPT+ALDM  Q Q++++L+   ER   
Sbjct: 424 FMDRYPHEFSGGQRQRIAIARAMVLRPKLVVLDEPTSALDMTVQVQIVNLLRDLQERYGL 483

Query: 202 PALLFITHDLAVAAGLCQRAIVLVNGEIAEQGSFGRLLQPPQHPYTQQLVASA 254
            A LFI+HDL V   +  + IV+  G++ E GS   L   P  PYTQQL+A+A
Sbjct: 484 -AYLFISHDLNVVRAMSHKMIVMKQGDVVEAGSAAELFNNPSDPYTQQLLAAA 535