Pairwise Alignments

Query, 135 a.a., DNA-binding transcriptional regulator H-NS from Serratia liquefaciens MT49

Subject, 130 a.a., H-NS family DNA-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 85.9 bits (211), Expect = 2e-22
 Identities = 55/135 (40%), Positives = 79/135 (58%), Gaps = 5/135 (3%)

Query: 1   MSEALKILNNIRTLRAQARECSLETLEEMLEKLEVVVNERREEDSQAQAEVEERTRKLQQ 60
           MSE L+IL + R L+A  ++ SL+ L ++  KLE ++ ER  E  +      ER  K+++
Sbjct: 1   MSEFLEILTHGRRLKAAVKDLSLDELRDLGAKLEKIIVEREAEAEEELKANAERIAKIEE 60

Query: 61  YREMLIADGIDPNELLQTMAATKAAGKAKRAARPAKYQYKDENGELKTWTGQGRTPAVIK 120
            R+ +   G+   +L  T  A K A K KRA RP KY+   +  E+ TWTGQGR P V K
Sbjct: 61  IRKQMAEIGLSVEDLGVT--AAKPAAK-KRAPRPPKYKIVVDGEEI-TWTGQGRMPTVFK 116

Query: 121 KAIEEQGKSLDDFLL 135
            A+ E G S+DDFL+
Sbjct: 117 NAV-EGGASMDDFLI 130