Pairwise Alignments

Query, 135 a.a., DNA-binding transcriptional regulator H-NS from Serratia liquefaciens MT49

Subject, 130 a.a., histone family protein nucleoid-structuring protein H-NS (RefSeq) from Shewanella sp. ANA-3

 Score = 94.0 bits (232), Expect = 7e-25
 Identities = 55/135 (40%), Positives = 84/135 (62%), Gaps = 5/135 (3%)

Query: 1   MSEALKILNNIRTLRAQARECSLETLEEMLEKLEVVVNERREEDSQAQAEVEERTRKLQQ 60
           MSE L+IL + R  +A  ++ S+E L ++  KL+ ++ ER    ++ Q  +  R  K+++
Sbjct: 1   MSEFLEILTHGRRFKAAVKDLSIEELRDLAAKLDKILVERESMAAEEQQAIAARNAKIEE 60

Query: 61  YREMLIADGIDPNELLQTMAATKAAGKAKRAARPAKYQYKDENGELKTWTGQGRTPAVIK 120
            R+ + A G+  ++L     A KAAGK KRA RPAKYQ  + NGE+  WTGQGR P V K
Sbjct: 61  IRQQMEAVGLSIDDL--GGVAVKAAGK-KRAPRPAKYQI-EVNGEVIQWTGQGRMPTVFK 116

Query: 121 KAIEEQGKSLDDFLL 135
             +  +G+S+DDFL+
Sbjct: 117 NEV-NKGRSMDDFLI 130