Pairwise Alignments

Query, 330 a.a., peptide ABC transporter ATP-binding protein SapD from Serratia liquefaciens MT49

Subject, 325 a.a., peptide ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  223 bits (569), Expect = 4e-63
 Identities = 125/324 (38%), Positives = 183/324 (56%), Gaps = 9/324 (2%)

Query: 2   PLLDIRNLTIEFMTAEGPVKAVDRVSMTLSEGEVRGLVGESGSGKSLIAKAICGVTKDNW 61
           P L ++NL   F T  G  KAVD  S  ++ GE+ GLVGESGSGKS+   ++ G+     
Sbjct: 4   PTLSVQNLRTHFFTGAGVAKAVDDTSFDVAPGEIVGLVGESGSGKSITGFSVLGLIDAPG 63

Query: 62  RVTADRFRFDDIDLLQLTPRERRKLVGHNVSMIFQEPQSCLDPSESIGRQLVQAIPGWTY 121
           R+ A R  F   DL  LTP   R+L G+ ++MIFQ+P   L+P   I  Q+++A+   T 
Sbjct: 64  RIVAGRVLFKGEDLTTLTPEALRRLRGNRIAMIFQDPMMTLNPVLRIDTQMIEAVQAHTR 123

Query: 122 KGRWWQRFNWRKRRAIELLHRVGIKDHKDIMGSFPYELTDGECQKVMIAIALANQPRLLI 181
             +   R     +RA + L  VGI    + + ++P++L+ G  Q+V IAIAL + P L+I
Sbjct: 124 VSKHAAR-----QRARDALASVGIPSPDERLRAYPHQLSGGMRQRVAIAIALLHDPELII 178

Query: 182 ADEPTNAMEPTTQAQIFRLLARLNQNNNTTILLISHDLQMMSKWADRVNVLYCGQTVESA 241
           ADEPT A++ T QAQI   + +L   ++T ++ +SHDL +++  ADR+ V+Y G+ VE+ 
Sbjct: 179 ADEPTTALDVTIQAQILAEMQKLCARSHTAMVWVSHDLAVVAGLADRICVMYAGRVVETG 238

Query: 242 QCEDLLAAPHHPYTQALIRAMPDFGRALPHKSRLNTLPGAIPSLEHLPIGCRLGPRCPYA 301
             +++L  P HPYT  LI ++P+  R       L  +PG  PS   LP+GC   PRC YA
Sbjct: 239 SVDEILERPRHPYTIGLIDSLPEKAR---RGESLTQIPGMAPSALKLPVGCAFAPRCVYA 295

Query: 302 QKKCIET-PRLRPVKNHLFACHFP 324
              C    P +     HLF C  P
Sbjct: 296 TSLCRSAEPPVTGEGTHLFRCFHP 319