Pairwise Alignments

Query, 277 a.a., D-alanyl-D-alanine endopeptidase from Serratia liquefaciens MT49

Subject, 395 a.a., D-alanyl-D-alanine carboxypeptidase from Sphingomonas koreensis DSMZ 15582

 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 29/265 (10%)

Query: 28  PSAQAAAPLALHSASVLVVNQRTGKTLYQKQANRVLPIASLSKLMTAMVVLD----SKRP 83
           P  +  AP+A       + +  +G  LY K A+R +P AS++K+MTA V  D     K  
Sbjct: 31  PPFETVAPVAF------MEDLSSGAVLYAKDADRRMPPASMAKMMTAYVAFDLIKQGKLK 84

Query: 84  LGNPIKVTPADRDLLKKTHSR-------LTLGSILSRRDMLHIALMSSENRAAAALSRGY 136
           L   + V P   +  +K H         L+ G  +S  ++++  ++ S N A   L+   
Sbjct: 85  LDQMVDVRP---ETWRKWHGPSAGSTMFLSPGQKVSVENLINGIVVVSGNDACVVLAEAV 141

Query: 137 PGGRKAFVAKMNQKARSLGMKHARFYDPTGLTP--RNVASARDLLKMV-----NHAYRYQ 189
            G  +AFV  MNQKA  LG+K++RF    G     R   +ARDL  +      NH   Y+
Sbjct: 142 AGTEEAFVNLMNQKAAELGLKNSRFGTSNGWPDEGRTYVTARDLAHLAKATISNHPDLYK 201

Query: 190 TIRRFSTDKQQIVRPGRGQLVYRSSNGLINNSAWKIQLQKTGFTNEAGHCLVMRTLIKGQ 249
             R +S +         G  + +++   +          KTG T+EAG+         G+
Sbjct: 202 --RFYSRESFTFGTTMGGAPITQANRDPLLGRVKGADGLKTGHTDEAGYGFTGSAEQNGR 259

Query: 250 PVVIILLGSKQRYGHYSDAIRLKAW 274
            +V+++ G         ++++   W
Sbjct: 260 RLVMVVAGLTSFNQRIEESVKFMDW 284