Pairwise Alignments

Query, 316 a.a., branched-chain amino acid ABC transporter permease from Serratia liquefaciens MT49

Subject, 300 a.a., high-affinity branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  234 bits (596), Expect = 3e-66
 Identities = 136/314 (43%), Positives = 194/314 (61%), Gaps = 26/314 (8%)

Query: 1   MDTLVQQTVNGLMLGSIYALIALGYTMVYGILRIINFAHGDVLMVGALSALSAIGVLQHH 60
           M+  VQQ VNGL LGSIY +IA+GYTMVYGI+ +INFAHGD+ M+G  +AL    +L   
Sbjct: 1   MEYFVQQLVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLLLTTF 60

Query: 61  FPTLSPYVTLLLAALIAMAVCSLVSMSIERLAYRRLRNAPRLAPLISGIGVSLLLQTLAM 120
              +   + LL+  ++ M   +L + +IER+AYR LR + RLAPLI+ IG+S++L     
Sbjct: 61  IAGVPVVLALLIMMVVGMLTAALWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQ 120

Query: 121 LIWSRNPLMFPQLLPMEPIALTSGSANHAPAVITGTGIATLAIALLVMAGLLL-----LV 175
           +         P+  P+ P+  +          + G  ++   I ++V+  +LL     +V
Sbjct: 121 VTQG------PRNKPIPPLVSSVYD-------LFGISVSLKQIIIVVITAILLSVFWYIV 167

Query: 176 EHSRFGRAMRATAENPQVAGLMGIEPNRIIVLTFALGGALAAVAGIMMASNYGNAGFSMG 235
             +  GRA RAT ++ ++A L+G++ +R I +TF +G ALAAVAG M    YG   F+ G
Sbjct: 168 NRTPLGRAQRATEQDRKMAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVFTDG 227

Query: 236 FLPGIKAFTAAVLGGIGNLRGAMLGGLLLGLFESLGTGYLGELTGGTFGSNYQDVFAFLI 295
           F PG+KAFTAAVLGGIG+L GA+LGGLL+GL ESL + Y        F  +Y+DV  F I
Sbjct: 228 FAPGVKAFTAAVLGGIGSLPGAVLGGLLIGLIESLWSAY--------FTIDYKDVATFSI 279

Query: 296 LIAVLVFRPSGLLG 309
           L  VL+F+PSG+LG
Sbjct: 280 LAIVLIFKPSGILG 293