Pairwise Alignments

Query, 554 a.a., oligopeptide ABC transporter substrate-binding protein OppA from Serratia liquefaciens MT49

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  153 bits (386), Expect = 2e-41
 Identities = 137/505 (27%), Positives = 227/505 (44%), Gaps = 58/505 (11%)

Query: 64  ATLDPNLAESNVEFYIFNDLFEGLLR-VGKNGEVIPALATKWETK--GTVWTFHLRPEAK 120
           +TLDP +      + +   LF+GL+  V    E+ P LA  +E    G ++TF LR   K
Sbjct: 39  STLDPAIGYDWQNWSMIKSLFDGLMDYVPGTTELRPDLAESYEISEDGKIFTFKLRKGVK 98

Query: 121 WSNGDPVTADDFVFSWRRLTDPKTASPYGSYLASAYVLNAAEINAGGKPPSELGVKALDA 180
           + NG  +TA D  +S  R+ +P T SP   + A+   +  A    GG+     G+   D 
Sbjct: 99  FHNGRELTAQDVKYSIERVVNPATQSPGAGFFATIKGVEEASAGKGGELS---GITVQDP 155

Query: 181 HTLQVTLAEPNSYLLKQLVHFPVLPVNRKVVEQYGKNWTQPQNFVGNGAFKLAQWVVNEK 240
           HT++  L  P++  L  +       V ++ VE++G ++ +  N VG+GAFKLA+W + ++
Sbjct: 156 HTIRFELTRPDATFLHVMALNFAHVVPKEEVEKHGADFGK--NPVGSGAFKLAEWTLGQR 213

Query: 241 VVVERNTQYWDNAHTVLNKVTFLPLQGFPEVA--RFRAGEIEL-GYSAPPELYQQLKKNL 297
           +V ER T YW+     L+++TF   Q  P VA  R + GEI++ G   PP  + ++  + 
Sbjct: 214 LVFERFTDYWNEGLPKLDRITFEVGQE-PVVALLRLQNGEIDVPGDGIPPAKFVEVTNDP 272

Query: 298 GDEQLVTY-PLLSTSYFAFNNRQPPFNDVRVRQALNLALDK----QVIAGKVL------- 345
             + L+     L T Y   N +  PF+ V VR+A+N+A++K    ++I G+ +       
Sbjct: 273 NFKDLIIRGGQLHTGYVTMNVKMAPFDKVEVRKAVNMAINKDRILRIINGRAVAANQPLP 332

Query: 346 ----GYGQQPA-WTFTPTGAGGFTLQAGVAAGWSQEQRIAQAKKLLAEAGFNAQHPLRFT 400
               GY +  A + + P GA     QAG+  G+S E  +            N     R  
Sbjct: 333 PSMPGYAKDYAGYAYDPEGAKKLLEQAGLGDGFSTELYV-----------MNTDPQPRIA 381

Query: 401 LLYSNDATIKKIVIAASAMWKKNLGAEVTLQNQERKVVLDNINNGQYSAAFSRWLADYND 460
                D     I  +  ++ + N+ A    +NQ   +         +S   + W+AD+ D
Sbjct: 382 QAIQQDLKAIGITASIKSLAQANVIAAGGEENQAPMI---------WSGGMA-WIADFPD 431

Query: 461 PSTFLNVFRSTSSE-----NSAKYANEHYDRLLHQATAAQSPEQVQQASQQAEDV---LA 512
           PS F               N + Y NE  D+   +A A   P +  +      D+   + 
Sbjct: 432 PSNFYGPILGCGGAVPGGWNWSWYCNEELDKKAAEADAIADPAKAAEREALWRDIYLKIM 491

Query: 513 VDTPVAPVYYEANATLVKPYVKGID 537
            D P AP++ E   T+    + G D
Sbjct: 492 EDAPWAPIFNEERFTIRSERIGGDD 516