Pairwise Alignments

Query, 421 a.a., ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 421 a.a., transcriptional regulator, ABC transporter from Synechococcus elongatus PCC 7942

 Score = 57.8 bits (138), Expect = 6e-13
 Identities = 80/360 (22%), Positives = 143/360 (39%), Gaps = 33/360 (9%)

Query: 38  YCNEIKQRFEAQT-GHTLEFIDLPPASDEKLSLFQQLFAAKDASAIDLFQADTVWIGVLN 96
           Y   +  RFE +  G  + ++D+P ++ E     + L A    +A D+   + V+   L 
Sbjct: 45  YFTALIDRFEQENPGTKVRWVDIPWSAMES----KILTAVSAGTAPDVVNLNPVFASQLA 100

Query: 97  KH--LLDLTDSVSDIKQD-FFPAAWQNNVVNGRVKAVPAYLDSGALYYRKDLLEKYG-EQ 152
               LLDL+ +V+  ++D + P  WQ + + G+   +P YL +    + ++L+++ G ++
Sbjct: 101 SRGALLDLSRAVTPEQRDRYLPNIWQASSLQGQAFGLPWYLTTRITIFNRNLMQQAGLQK 160

Query: 153 PPETWADLTRVATHIQQAERAAGHKNFWGLVFQ--GKSYEGLTCNALEWVASQNGGSFID 210
           PP T+A+L   A  I+  +R   +  F   V +  G+  E +          Q G   +D
Sbjct: 161 PPATYAELASAAKQIR--DRTGKYAFFVTFVPEDSGEVLESMV---------QMGVKLVD 209

Query: 211 AQGNITINNPQAAQALNMAAGWIG----KITPKGTLGYMEEESRAVFQNGDALFMRNWPY 266
            QG    N P+   A      W+      + P+ +L      +  ++Q+G+   ++  P 
Sbjct: 210 DQGKAAFNTPEGIAAFRY---WVDLYQQGLLPQESLTQGHRRAVELYQSGEIALLQTGPE 266

Query: 267 AYVLAQDSSSAIRGKVGVMPLPKGADGHSVSALGGWQWAINGYTKHPEAAIALLKIVSDA 326
                  ++ AI       P   G  G    A+      +       E  +     V+D+
Sbjct: 267 FLNAIATNAPAIAAVSAPAPQLTGETGKRNVAV--MNVVVPQDASDREIGLKFALYVTDS 324

Query: 327 ESQKRALALLGQAPSRTALYDDPQVLAQAPYLADFKGIFAQAMPRPATQTKRQYAQVSRA 386
            +Q          PS TA   D +   Q    AD     AQA    A Q  +    V  A
Sbjct: 325 ANQLAFAKEANVLPSTTASLRDYR--QQLRDRADISSTLAQARSISAAQMDQAQVLVPAA 382