Pairwise Alignments

Query, 331 a.a., sugar ABC transporter permease from Serratia liquefaciens MT49

Subject, 293 a.a., ABC transporter for D-Glucosamine, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  217 bits (552), Expect = 3e-61
 Identities = 109/290 (37%), Positives = 185/290 (63%), Gaps = 16/290 (5%)

Query: 38  AWLLVAPAMLLLAVVAGWPLLRTLFYSFTDAMLDAPDDYRFVGFANYLDLTEGGHHYGVL 97
           AWLL+ P ++++  V GWPL+ T+  SFTDA L   +   FVG ANY+ +  G +    L
Sbjct: 10  AWLLMLPLLVVMTAVIGWPLVDTVRLSFTDAKLVGTEG-GFVGTANYIKMLGGSNFQRAL 68

Query: 98  ADPLWWLAVGNTLRFSLLSVSLELVFGMLLALLMNQKFRGQGLVRTAILVPWAIPTIVSA 157
               W         F+++SV+ E+V G+L ALL+NQ+FRG+  +R  +++PWA+PT+V+A
Sbjct: 69  VTTTW---------FAVISVAAEMVLGVLAALLLNQQFRGRTALRALMILPWALPTVVNA 119

Query: 158 KMWGWMFHDQYGVVNDLLLKTGIIATPLAWVAEPGLSMWAVVIADVWKTTPFMALMLLAA 217
            +W  +++ +YG +N  L + G++ +  +W+ EPG ++ A+++AD WK  P +AL+ LAA
Sbjct: 120 TLWRLIYNPEYGALNAALTQLGLLDSYRSWLGEPGTALAALIVADCWKNFPLVALIALAA 179

Query: 218 LQLIPGDLYEAARIDGANAWQRFRRITLPLIMPAMIVALIFRVMDALRVFDLIYVLT--- 274
           LQ +P D+  A+ +DGA  + RFR + +P +   ++VAL+ R ++A +VFD+I+V+T   
Sbjct: 180 LQAVPRDITAASLVDGAGPFNRFRFVIMPYLAGPLLVALVLRTIEAFKVFDIIWVMTRGG 239

Query: 275 -SNSEATVSVSGYARDRMVSYQEMGSGSAASVLVFMMVAGIAACFLTLGR 323
            +NS  T+S+  Y      S+Q  GSG++ +++V ++V  +AA +  L R
Sbjct: 240 PANSTRTLSILVY--QEAFSFQRAGSGASLALIVTLLVTILAAAYAALLR 287