Pairwise Alignments

Query, 331 a.a., sugar ABC transporter permease from Serratia liquefaciens MT49

Subject, 328 a.a., ABC transporter for D-trehalose/D-maltose/sucrose, permease component 1 (ThuF) (from data) from Sinorhizobium meliloti 1021

 Score =  340 bits (872), Expect = 3e-98
 Identities = 167/315 (53%), Positives = 231/315 (73%), Gaps = 4/315 (1%)

Query: 15  DESAQVLPARRSKLNHQQRRSRIAWLLVAPAMLLLAVVAGWPLLRTLFYSFTDAMLDAPD 74
           D  A +    R   + Q +R R AWL +AP  L+LA+VAGWPL+RT+++SFT+A L    
Sbjct: 8   DRPAALAHGGRIGSDLQAQRVRSAWLFLAPTFLVLALVAGWPLIRTIYFSFTNASLTNLS 67

Query: 75  DYRFVGFANYLD---LTEGGHHY-GVLADPLWWLAVGNTLRFSLLSVSLELVFGMLLALL 130
              FVGFANYL    L  G   Y G+LADP WW AV NTL+F++LSVS+E   G+++AL+
Sbjct: 68  GAEFVGFANYLSWITLKSGRTIYRGLLADPAWWNAVWNTLKFTVLSVSIETALGLIVALV 127

Query: 131 MNQKFRGQGLVRTAILVPWAIPTIVSAKMWGWMFHDQYGVVNDLLLKTGIIATPLAWVAE 190
           +N +F G+GLVR AIL+PWAIPTIVSAKMW WM +DQ+G++ND+L+  G+I   +AW A 
Sbjct: 128 LNAQFPGRGLVRAAILIPWAIPTIVSAKMWAWMLNDQFGILNDMLIGLGLIGEKIAWTAS 187

Query: 191 PGLSMWAVVIADVWKTTPFMALMLLAALQLIPGDLYEAARIDGANAWQRFRRITLPLIMP 250
           P  +M A +I DVWKTTPFMAL++LA LQ++PGD+YEAA+IDG +  + F R+TLPLI P
Sbjct: 188 PDTAMIAELIVDVWKTTPFMALLILAGLQMVPGDIYEAAKIDGVHPVRVFWRVTLPLIRP 247

Query: 251 AMIVALIFRVMDALRVFDLIYVLTSNSEATVSVSGYARDRMVSYQEMGSGSAASVLVFMM 310
           A++VA+IFR++DALR+FDLIYVLT N+  T ++S  AR+ +  + +   G+AAS ++F++
Sbjct: 248 ALMVAVIFRMLDALRIFDLIYVLTPNNAQTKTMSVMARENLFDFDKFAYGAAASTMLFLI 307

Query: 311 VAGIAACFLTLGRLN 325
           +A I   ++ LGRLN
Sbjct: 308 IATITILYMWLGRLN 322