Pairwise Alignments

Query, 331 a.a., sugar ABC transporter permease from Serratia liquefaciens MT49

Subject, 298 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  152 bits (383), Expect = 1e-41
 Identities = 102/295 (34%), Positives = 150/295 (50%), Gaps = 23/295 (7%)

Query: 36  RIAWLLVAPAMLLLAVVAGWPLLRTLFYSFTDAMLDAPDDYRFVGFANY---LDLTEGGH 92
           R  W L  P +L+LA    +PLL  +  S  D  L AP    FVG  NY   L  TE  H
Sbjct: 18  RFGWFLTLPGVLMLAATIAFPLLWAVATSLFDFTLIAPTYDTFVGLDNYALALGNTEFLH 77

Query: 93  HYGVLADPLWWLAVGNTLRFSLLSVSLELVFGMLLALLMNQKFRGQGLVRTAILVPWAIP 152
                     WL VG    F +  V +E   G L+AL++N   RG+ +    +L P  I 
Sbjct: 78  AS--------WLTVG----FVVAVVLIEFAIGFLIALMLNGVRRGKPIYYAILLCPLLIN 125

Query: 153 TIVSAKMWGWMFHDQYGVVNDLLLKTGIIATPLAWVAEPGLSMWAVVIADVWKTTPFMAL 212
            +V   +W  + H   GV N  L   G+  +P+ W+ +  ++ W +V  D+W    FM +
Sbjct: 126 PVVVGLVWRMVLHPTLGVANYALGLIGL--SPVNWLGDVTVAFWTLVGVDIWHQVSFMIV 183

Query: 213 MLLAALQLIPGDLYEAARIDGANAWQRFRRITLPLIMPAMIVALIFRVMDALRVFDLIYV 272
           +LLA L  +P + YEAAR+DGA+ +QRF  ITLPL+   ++V L+ R++ A++ +DL+Y+
Sbjct: 184 LLLAGLSALPAEPYEAARVDGASVFQRFWHITLPLMRRVILVTLLIRMIFAVKTYDLVYI 243

Query: 273 LTSNSEAT----VSVSGYARDRMVSYQEMGSGSAASVLVFMMVAGIAACFLTLGR 323
           +T     T    VS S Y R   V    +G  +A + L+ + V GI A    L R
Sbjct: 244 MTRGGPGTATDLVSYSIY-RTAFVGL-NLGQATAMAGLLLIPVLGITAYLYRLMR 296